Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RTP4Q96DX8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNY1P11-201ENST00000363759 113 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 MIR562-201ENST00000384894 95 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RTP4Q96DX8 Y_RNA.580-201ENST00000391004 95 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNA5SP496-201ENST00000391240 109 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 AL627390.1-201ENST00000396055 340 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNA5SP272-201ENST00000516095 111 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 SNORD116-25-201ENST00000516517 92 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNU7-121P-201ENST00000516604 62 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 uc_338.4-201ENST00000616635 176 ntBASIC1.73□□□□□ -2.13
RTP4Q96DX8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RTP4Q96DX8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RTP4Q96DX8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 RNU6-728P-201ENST00000365375 104 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 RNU6-643P-201ENST00000384018 107 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 MIR515-2-201ENST00000384883 83 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 MIR515-1-201ENST00000384884 83 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 RNU6-239P-201ENST00000390990 99 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 AL512604.1-201ENST00000404812 257 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 AC245047.3-201ENST00000429428 127 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 SNRPGP10-201ENST00000432323 225 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 HMGN1P7-201ENST00000491722 313 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 SNORD77.4-201ENST00000516158 81 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 MIR4498-201ENST00000577599 66 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 MIR8081-201ENST00000611533 95 ntBASIC1.72□□□□□ -2.13
RTP4Q96DX8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
RTP4Q96DX8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RTP4Q96DX8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
RTP4Q96DX8 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 RNU6-151P-201ENST00000364158 107 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 RNY3P5-201ENST00000384127 102 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 RNU6-768P-201ENST00000384683 107 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 SNORD72-201ENST00000390994 80 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 MLLT10P1-201ENST00000418346 262 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 AL049830.1-201ENST00000468034 425 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 RNU6-406P-201ENST00000516470 107 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 RNU7-149P-201ENST00000516739 59 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RTP4Q96DX8 U1.36-201ENST00000620684 176 ntBASIC1.71□□□□□ -2.14
RTP4Q96DX8 MIR126-201ENST00000362291 85 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 RNU6-449P-201ENST00000383914 107 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 MIR17-201ENST00000385012 84 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 RNU4-43P-201ENST00000410628 137 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 AC107027.2-201ENST00000512197 115 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 AC108729.3-201ENST00000513484 108 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
RTP4Q96DX8 AP002004.2-201ENST00000531656 154 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 SUB1P4-201ENST00000566062 339 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 MIR2681-201ENST00000581814 105 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 JPX_2.1-201ENST00000614161 69 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 MIR8054-201ENST00000620877 86 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 MTND1P7-201ENST00000632801 297 ntBASIC1.7□□□□□ -2.14
RTP4Q96DX8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RTP4Q96DX8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 RNU6-296P-201ENST00000384608 107 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 MIR522-201ENST00000385071 87 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 RNU6-440P-201ENST00000390882 105 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 RNU6-131P-201ENST00000391144 107 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 AL158823.1-201ENST00000418441 478 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.69□□□□□ -2.14
RTP4Q96DX8 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 MRPS17P9-201ENST00000511924 393 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 RNU2-56P-201ENST00000516826 190 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 AL358944.1-201ENST00000528537 144 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 Pinc.1-201ENST00000616452 154 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.69□□□□□ -2.14
RTP4Q96DX8 AC008555.8-201ENST00000623602 2168 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 SNORD68-201ENST00000363214 84 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 RNU6-112P-201ENST00000363599 104 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 SNORD50B-201ENST00000364995 70 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 RNU4-11P-201ENST00000365287 132 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.68□□□□□ -2.14
RTP4Q96DX8 RNU7-94P-201ENST00000459576 63 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.68□□□□□ -2.14
RTP4Q96DX8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 RNU6-197P-201ENST00000516680 100 ntBASIC1.68□□□□□ -2.14
RTP4Q96DX8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.68□□□□□ -2.14
RTP4Q96DX8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms