Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 MIR524-201ENST00000385242 87 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 SNORA11.4-201ENST00000408823 129 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 AL445646.1-201ENST00000431784 216 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 RPS29P6-201ENST00000438196 145 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 RPS26P48-201ENST00000491713 339 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 SNORA31.10-201ENST00000516482 106 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 RNU7-28P-201ENST00000516759 62 ntBASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VTI1AQ96AJ9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP89-201ENST00000410300 108 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP136-201ENST00000410906 107 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP148-201ENST00000516527 94 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 MIR3126-201ENST00000577443 74 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 MIR3605-201ENST00000583214 100 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 AC002984.1-201ENST00000591692 448 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 uc_338.28-201ENST00000612082 187 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 MIR6817-201ENST00000615588 66 ntBASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VTI1AQ96AJ9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 RNU1-91P-201ENST00000364746 163 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 MIR597-201ENST00000384968 97 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 MIR29C-201ENST00000385231 88 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 AC114811.1-201ENST00000507207 168 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 MIR5094-201ENST00000578766 85 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 AC078899.2-201ENST00000595282 212 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 AL590808.1-201ENST00000618696 141 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 AC015726.2-201ENST00000620112 122 ntBASIC3.09□□□□□ -1.91
VTI1AQ96AJ9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.92
VTI1AQ96AJ9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
VTI1AQ96AJ9 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 MIR450A1-201ENST00000362262 91 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 RNU6-349P-201ENST00000362402 107 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 Y_RNA.116-201ENST00000363292 103 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 RNU6-1019P-201ENST00000364424 107 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 Y_RNA.440-201ENST00000384120 114 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 SNORA70B-201ENST00000384210 135 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 MIR570-201ENST00000384917 97 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 HSPE1P9-201ENST00000440046 311 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 COX6CP6-201ENST00000490840 228 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 RNU6-168P-201ENST00000516189 101 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 RNA5SP170-201ENST00000517150 101 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 AC007012.1-201ENST00000567192 175 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 AC069114.2-201ENST00000604699 304 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 AC245884.12-201ENST00000615364 59 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 FO624990.1-201ENST00000636373 85 ntBASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTI1AQ96AJ9 ZNF720P1-201ENST00000562403 1939 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 Y_RNA.281-201ENST00000364774 94 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 Y_RNA.549-201ENST00000384657 102 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 SNORD53-201ENST00000579969 78 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 ZNF861P-201ENST00000588126 639 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
VTI1AQ96AJ9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 Y_RNA.43-201ENST00000362670 111 ntBASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 MIR1283-2-201ENST00000408621 87 ntBASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 HMGN2P32-201ENST00000444648 269 ntBASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 AC011753.1-201ENST00000451001 220 ntBASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 AP003484.1-201ENST00000530974 250 ntBASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VTI1AQ96AJ9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 SNORA67.1-201ENST00000364749 141 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 RNU6-690P-201ENST00000365242 106 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 RNU6-163P-201ENST00000384396 106 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 RNU6-106P-201ENST00000384405 107 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 AL590004.2-201ENST00000404787 371 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 RNY4P20-201ENST00000516678 93 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 AC064859.1-201ENST00000624741 174 ntBASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VTI1AQ96AJ9 U8.2-201ENST00000363156 134 ntBASIC3.04□□□□□ -1.92
VTI1AQ96AJ9 RNU11-3P-201ENST00000391111 133 ntBASIC3.04□□□□□ -1.92
VTI1AQ96AJ9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
VTI1AQ96AJ9 Z82195.2-201ENST00000612348 18351 ntBASIC3.04□□□□□ -1.92
VTI1AQ96AJ9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 RNU6-1107P-201ENST00000364817 104 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 SNORA4.2-201ENST00000365313 147 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 MIR181B1-201ENST00000385240 110 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 SNORD12C-201ENST00000386307 89 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 RNU6-554P-201ENST00000410466 106 ntBASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.03□□□□□ -1.92
VTI1AQ96AJ9 SNORA28-201ENST00000606769 126 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms