Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RNA5SP456-201ENST00000364002 114 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 RNU1-52P-201ENST00000384190 164 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 MIR515-2-201ENST00000384883 83 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 MIR515-1-201ENST00000384884 83 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 RNU6-1186P-201ENST00000410429 97 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.68□□□□□ -1.98
DDX1Q92499 BX510359.4-201ENST00000423750 193 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 CALM2P4-201ENST00000430810 426 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 RNU6-537P-201ENST00000517277 103 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 AC011604.1-201ENST00000545978 196 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 SNORD14A-201ENST00000606526 91 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 AL359075.3-201ENST00000613288 217 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 AC106754.2-201ENST00000623006 233 ntBASIC2.68□□□□□ -1.98
DDX1Q92499 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
DDX1Q92499 Y_RNA.85-201ENST00000363014 111 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 RNU6-1107P-201ENST00000364817 104 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 SNORA11.4-201ENST00000408823 129 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 AC007064.1-201ENST00000412238 351 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 RPS15AP28-201ENST00000435088 386 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
DDX1Q92499 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 RNU1-142P-201ENST00000516682 145 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 AC005786.1-201ENST00000588553 154 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 AL353997.5-201ENST00000618886 171 ntBASIC2.67□□□□□ -1.98
DDX1Q92499 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX1Q92499 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
DDX1Q92499 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
DDX1Q92499 RNU6-862P-201ENST00000362804 105 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 SNORD73B-201ENST00000364394 72 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 U8.6-201ENST00000364939 135 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 Y_RNA.328-201ENST00000365208 113 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 MIR518A2-201ENST00000384966 87 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 MIR27B-201ENST00000385129 97 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RNA5SP323-201ENST00000391094 133 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 HMGN2P39-201ENST00000398005 273 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RNY4P30-201ENST00000410216 95 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 CST2P1-201ENST00000425770 87 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 MTATP6P21-201ENST00000440681 189 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 AC023449.1-201ENST00000454464 154 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RNU7-99P-201ENST00000516271 62 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RNU6-412P-201ENST00000516434 106 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 SCARNA15-202ENST00000516881 127 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RNU6-365P-201ENST00000517113 106 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 AC004486.1-201ENST00000546846 233 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 AC007012.1-201ENST00000567192 175 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 AP001318.4-201ENST00000616637 121 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.66□□□□□ -1.98
DDX1Q92499 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
DDX1Q92499 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DDX1Q92499 RNU6-766P-201ENST00000362478 107 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 RNU1-96P-201ENST00000364163 162 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 SNORD61-201ENST00000384252 73 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 RNA5SP465-201ENST00000391195 109 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 RNA5SP467-201ENST00000391274 118 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR1263-201ENST00000408324 86 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 RNU6-504P-201ENST00000516568 104 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR3129-201ENST00000581095 76 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR3670-2-201ENST00000582974 65 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR3670-1-201ENST00000584160 65 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR3670-3-201ENST00000584855 65 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 MIR3670-4-201ENST00000612260 65 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 AC009831.4-201ENST00000620744 325 ntBASIC2.65□□□□□ -1.99
DDX1Q92499 SNORD24-201ENST00000383884 75 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 Y_RNA.528-201ENST00000384575 108 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 Y_RNA.549-201ENST00000384657 102 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 MIR570-201ENST00000384917 97 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 MIR764-201ENST00000390811 85 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 SNORA12.1-201ENST00000390873 148 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 AL117342.1-201ENST00000404861 406 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 MRPS17P9-201ENST00000511924 393 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 RNU6-113P-201ENST00000516653 101 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 AC024995.1-201ENST00000523014 93 ntBASIC2.64□□□□□ -1.99
DDX1Q92499 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
DDX1Q92499 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
DDX1Q92499 MIR6073-201ENST00000352083 89 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 RNU6-888P-201ENST00000363010 101 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 MIR548A2-201ENST00000384956 97 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 SNORD72-201ENST00000390994 80 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 MIR1289-2-201ENST00000408360 111 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 RN7SKP223-201ENST00000410582 62 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 RNA5SP136-201ENST00000410906 107 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX1Q92499 RNU6-826P-201ENST00000516827 104 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 RNU6-94P-201ENST00000607728 107 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 FO624990.1-201ENST00000636373 85 ntBASIC2.63□□□□□ -1.99
DDX1Q92499 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
DDX1Q92499 SNORA3A-201ENST00000364113 130 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 DEFA7P-201ENST00000382676 285 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 SNORD12C-201ENST00000386307 89 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 SNORD77.3-201ENST00000391113 65 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 HMGN2P3-201ENST00000433603 273 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 HMGN2P5-201ENST00000436882 273 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 RNU7-128P-201ENST00000517247 62 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
DDX1Q92499 MIR7111-201ENST00000619751 72 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms