Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC009237.6-201ENST00000446969 424 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 ATP5J2P3-201ENST00000451550 258 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-126P-201ENST00000516685 103 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 MIR3169-201ENST00000578032 83 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 AC131055.1-201ENST00000584626 316 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 MIR6845-201ENST00000613182 61 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 JPX_2.1-201ENST00000614161 69 ntBASIC2.2□□□□□ -2.06
SLC44A3Q8N4M1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-160P-201ENST00000384591 107 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 SNORD72-201ENST00000390994 80 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 CST2P1-201ENST00000425770 87 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 AC023449.1-201ENST00000454464 154 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 AC008507.4-201ENST00000585464 127 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 AL359881.1-201ENST00000602916 267 ntBASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-834P-201ENST00000362367 110 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 RNU1-51P-201ENST00000365345 176 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 MIR624-201ENST00000385217 97 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 SNORA26-201ENST00000391286 122 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 AC099677.2-201ENST00000436385 175 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SLC44A3Q8N4M1 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 SNORA1B-201ENST00000362535 133 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 RNA5SP493-201ENST00000364115 91 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR515-2-201ENST00000384883 83 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR515-1-201ENST00000384884 83 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR548A2-201ENST00000384956 97 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 SNORA12.1-201ENST00000390873 148 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 RNU11-5P-201ENST00000391216 129 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR891A-201ENST00000401237 79 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 AC024995.1-201ENST00000523014 93 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 AC090049.2-201ENST00000550377 109 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR4498-201ENST00000577599 66 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 MIR3121-201ENST00000579680 77 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 AL591926.4-201ENST00000616895 298 ntBASIC2.17□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 MIR522-201ENST00000385071 87 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AL603914.1-201ENST00000401964 204 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 Y_RNA.621-201ENST00000411065 96 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 MLLT10P1-201ENST00000418346 262 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AC233266.1-201ENST00000454518 96 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-772P-201ENST00000516042 105 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RN7SKP179-201ENST00000516126 217 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RNU1-142P-201ENST00000516682 145 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 RNU6-365P-201ENST00000517113 106 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AC242852.1-201ENST00000612151 96 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AC244015.1-201ENST00000622301 99 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 MIR3914-2-201ENST00000637339 95 ntBASIC2.16□□□□□ -2.06
SLC44A3Q8N4M1 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
SLC44A3Q8N4M1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
SLC44A3Q8N4M1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-235P-201ENST00000362644 107 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-862P-201ENST00000362804 105 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-888P-201ENST00000363010 101 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-508P-201ENST00000363231 103 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 SNORD24-201ENST00000383884 75 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 SNORA1-201ENST00000384107 130 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 SNORD61-201ENST00000384252 73 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 SNORA40.5-201ENST00000391061 128 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNA5SP127-201ENST00000411051 133 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AL606517.2-201ENST00000442855 241 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AL158147.1-201ENST00000443970 75 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AL163195.1-201ENST00000496941 348 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 RNU6-919P-201ENST00000516731 104 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AP002004.2-201ENST00000531656 154 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 MIR4762-201ENST00000585261 75 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AC087685.1-201ENST00000587507 141 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SLC44A3Q8N4M1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
SLC44A3Q8N4M1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 304.8 ms