Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.81□□□□□ -1.96
USP48Q86UV5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
USP48Q86UV5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
USP48Q86UV5 MIR126-201ENST00000362291 85 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 Y_RNA.634-201ENST00000364811 113 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 RNU6-44P-201ENST00000384045 107 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 RNVU1-2-201ENST00000516326 135 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 RNU7-193P-201ENST00000516723 65 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.8□□□□□ -1.96
USP48Q86UV5 AL591926.4-201ENST00000616895 298 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 U1.36-201ENST00000620684 176 ntBASIC2.8□□□□□ -1.96
USP48Q86UV5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
USP48Q86UV5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP48Q86UV5 Y_RNA.280-201ENST00000364765 112 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
USP48Q86UV5 RNA5SP501-201ENST00000410990 112 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.79□□□□□ -1.96
USP48Q86UV5 OR9P1P-201ENST00000496431 281 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 RNA5SP153-201ENST00000516498 76 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 RNU6-126P-201ENST00000516685 103 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 RNU7-28P-201ENST00000516759 62 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 SNORA31.15-201ENST00000516771 132 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 RNU2-60P-201ENST00000517290 128 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 MIR4662B-201ENST00000579498 81 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 U7.2-201ENST00000607576 63 ntBASIC2.79□□□□□ -1.96
USP48Q86UV5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.79□□□□□ -1.96
USP48Q86UV5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
USP48Q86UV5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
USP48Q86UV5 U8.1-201ENST00000362843 134 ntBASIC2.78□□□□□ -1.96
USP48Q86UV5 RNU6-508P-201ENST00000363231 103 ntBASIC2.78□□□□□ -1.96
USP48Q86UV5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.78□□□□□ -1.96
USP48Q86UV5 MIR7111-201ENST00000619751 72 ntBASIC2.78□□□□□ -1.96
USP48Q86UV5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
USP48Q86UV5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP48Q86UV5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
USP48Q86UV5 RNA5SP393-201ENST00000363423 117 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 SNORA63D-201ENST00000364359 132 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 RNU6-1325P-201ENST00000364905 105 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 RNU6-1138P-201ENST00000365359 106 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 Y_RNA.486-201ENST00000384398 107 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 RNU6-950P-201ENST00000384651 107 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 Y_RNA.584-201ENST00000391090 114 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 RNA5SP482-201ENST00000391269 118 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 AL035461.1-201ENST00000421490 332 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 SNORA31.11-201ENST00000516528 139 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 RNU7-149P-201ENST00000516739 59 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.77□□□□□ -1.97
USP48Q86UV5 AC087685.1-201ENST00000587507 141 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 AC067747.1-201ENST00000608026 250 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 MIR8054-201ENST00000620877 86 ntBASIC2.77□□□□□ -1.97
USP48Q86UV5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USP48Q86UV5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
USP48Q86UV5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
USP48Q86UV5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
USP48Q86UV5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP48Q86UV5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
USP48Q86UV5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
USP48Q86UV5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 RNU6-429P-201ENST00000384582 108 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 MIR520A-201ENST00000384862 85 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 SNORA12.1-201ENST00000390873 148 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 RNU6-440P-201ENST00000390882 105 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 SNORA26-201ENST00000391286 122 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 RNA5SP450-201ENST00000411206 102 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 MLLT10P1-201ENST00000418346 262 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 AL158823.1-201ENST00000418441 478 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 SUB1P4-201ENST00000566062 339 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 SNORA28-201ENST00000606769 126 ntBASIC2.76□□□□□ -1.97
USP48Q86UV5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.76□□□□□ -1.97
USP48Q86UV5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.76□□□□□ -1.97
USP48Q86UV5 AC005336.3-201ENST00000623833 2679 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 RNU6-235P-201ENST00000362644 107 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 SNORD68-201ENST00000363214 84 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 MIR522-201ENST00000385071 87 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 RNU6-919P-201ENST00000516731 104 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 Y_RNA.712-201ENST00000517011 92 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.75□□□□□ -1.97
USP48Q86UV5 MIR3121-201ENST00000579680 77 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 AP000942.3-201ENST00000603702 160 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.75□□□□□ -1.97
USP48Q86UV5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.75□□□□□ -1.97
USP48Q86UV5 Pinc.1-201ENST00000616452 154 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.75□□□□□ -1.97
USP48Q86UV5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
USP48Q86UV5 SNORA25.7-201ENST00000364375 127 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 AL023284.1-201ENST00000403956 276 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 RN7SKP200-201ENST00000410564 320 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 RNU2-70P-201ENST00000410718 179 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 RNU2-7P-201ENST00000410794 178 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.74□□□□□ -1.97
USP48Q86UV5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.74□□□□□ -1.97
USP48Q86UV5 FTH1P12-201ENST00000432137 551 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 AC090142.3-201ENST00000519012 385 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 AC007751.1-201ENST00000529260 376 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 MIR5007-201ENST00000583098 95 ntBASIC2.74□□□□□ -1.97
USP48Q86UV5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms