Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RN7SKP200-201ENST00000410564 320 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 RN7SKP220-201ENST00000410611 288 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 AL035398.1-201ENST00000430869 322 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 RNU2-35P-201ENST00000516446 142 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-1116P-201ENST00000517269 99 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 AC078899.2-201ENST00000595282 212 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 MIR8054-201ENST00000620877 86 ntBASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PRPF38BQ5VTL8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 SNORA25.6-201ENST00000364121 118 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 Y_RNA.221-201ENST00000364248 96 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 SNORA27-201ENST00000384323 126 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-424P-201ENST00000384367 105 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 SNORA3.2-201ENST00000408221 125 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 RPL23AP67-201ENST00000465341 474 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 AL353997.5-201ENST00000618886 171 ntBASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF38BQ5VTL8 AC096644.4-201ENST00000563417 2912 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 FAM35CP-201ENST00000554755 2470 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-1099P-201ENST00000363533 107 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 MIR1289-2-201ENST00000408360 111 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 MIR1912-201ENST00000410389 80 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 RPL39P39-201ENST00000455840 151 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 RNU7-61P-201ENST00000515897 61 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 RNU2-13P-201ENST00000515909 113 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 AC079600.2-201ENST00000550076 130 ntBASIC3.5□□□□□ -1.85
PRPF38BQ5VTL8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 AC009487.2-201ENST00000420969 6821 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 Y_RNA.73-201ENST00000362910 113 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 RNY1P1-201ENST00000364372 112 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 MIR7-2-201ENST00000384970 110 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 Y_RNA.601-201ENST00000410500 113 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 AC022254.1-201ENST00000567857 235 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 MIR622-201ENST00000638396 96 ntBASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF38BQ5VTL8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 Y_RNA.244-201ENST00000364484 109 ntBASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 AC069114.2-201ENST00000604699 304 ntBASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF38BQ5VTL8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-497P-201ENST00000365316 104 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-1276P-201ENST00000365372 104 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 RNU6-787P-201ENST00000384032 107 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 MIR489-201ENST00000384923 84 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 AL022718.1-201ENST00000412004 84 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 AC005786.1-201ENST00000588553 154 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 IGLL4P-201ENST00000614590 133 ntBASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF38BQ5VTL8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 MIR423-201ENST00000362201 94 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 RNU1-91P-201ENST00000364746 163 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 RNU6-644P-201ENST00000391155 98 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 SNORD109B-201ENST00000458961 67 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 SNORD109A-201ENST00000459128 67 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 RNU7-96P-201ENST00000459535 64 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 AC113410.1-201ENST00000505029 247 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 RNU6-521P-201ENST00000516663 105 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 U7.3-201ENST00000616123 62 ntBASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PRPF38BQ5VTL8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 RNU6-1019P-201ENST00000364424 107 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 SNORA4.2-201ENST00000365313 147 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 Y_RNA.507-201ENST00000384500 99 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 AC015922.2-201ENST00000435593 184 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 RNU6-162P-201ENST00000516228 103 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 AC090821.2-201ENST00000523552 176 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 AC012531.4-201ENST00000616509 177 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 AC027279.3-201ENST00000625055 122 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.45□□□□□ -1.86
PRPF38BQ5VTL8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms