Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 RNU6-239P-201ENST00000390990 99 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 AL049830.1-201ENST00000468034 425 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 AC107027.2-201ENST00000512197 115 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 SNORD77.4-201ENST00000516158 81 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 RNU7-121P-201ENST00000516604 62 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 RNU6-126P-201ENST00000516685 103 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 RNU2-56P-201ENST00000516826 190 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 AL160236.1-201ENST00000556317 195 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 MIR3124-201ENST00000582636 67 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 AC104465.1-201ENST00000611365 139 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 MTND1P7-201ENST00000632801 297 ntBASIC2.09□□□□□ -2.07
VPS53Q5VIR6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
VPS53Q5VIR6 SNORA63D-201ENST00000364359 132 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 RNU6-643P-201ENST00000384018 107 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 SNRPGP8-201ENST00000454064 226 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 RNU7-200P-201ENST00000516105 62 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 RNU6-561P-201ENST00000516222 102 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.703-201ENST00000516846 111 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 SNORA44.1-201ENST00000517031 108 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 AC087685.1-201ENST00000587507 141 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 AL049861.1-201ENST00000603130 150 ntBASIC2.08□□□□□ -2.08
VPS53Q5VIR6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS53Q5VIR6 SNORD45.3-201ENST00000363836 72 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.398-201ENST00000383952 99 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 SNRPGP10-201ENST00000432323 225 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 AL606517.2-201ENST00000442855 241 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 AC108210.2-201ENST00000503681 201 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 MIR4662B-201ENST00000579498 81 ntBASIC2.07□□□□□ -2.08
VPS53Q5VIR6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VPS53Q5VIR6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNU6-449P-201ENST00000383914 107 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNU6-484P-201ENST00000384016 107 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.506-201ENST00000384494 102 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNU6-125P-201ENST00000384505 107 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNA5SP109-201ENST00000391010 116 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 SNORA79-201ENST00000408376 140 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 AL392103.1-201ENST00000447000 198 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS53Q5VIR6 OR9P1P-201ENST00000496431 281 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNA5SP153-201ENST00000516498 76 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.714-201ENST00000517065 90 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 MIR4762-201ENST00000585261 75 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 AL591926.4-201ENST00000616895 298 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.06□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 RNU6-112P-201ENST00000363599 104 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.242-201ENST00000364473 110 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 FTH1P12-201ENST00000432137 551 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 RNU6-197P-201ENST00000516680 100 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 MTND5P41-201ENST00000517498 206 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 MIR4524B-201ENST00000581569 115 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 MIR3133-201ENST00000583157 78 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 AC103810.8-201ENST00000607347 118 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 MIR8054-201ENST00000620877 86 ntBASIC2.05□□□□□ -2.08
VPS53Q5VIR6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS53Q5VIR6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VPS53Q5VIR6 MIR126-201ENST00000362291 85 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 SNORD116-18-201ENST00000383961 92 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 MIR520A-201ENST00000384862 85 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 MIR522-201ENST00000385071 87 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VPS53Q5VIR6 SNORA26-201ENST00000391286 122 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 AC006461.1-201ENST00000412637 326 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VPS53Q5VIR6 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 SNORA31.17-201ENST00000516953 127 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
VPS53Q5VIR6 AC097639.2-201ENST00000603159 172 ntBASIC2.04□□□□□ -2.08
VPS53Q5VIR6 RNU6-774P-201ENST00000363238 107 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 RNU6-1130P-201ENST00000365434 107 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 RNU6-440P-201ENST00000390882 105 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 RNU6-131P-201ENST00000391144 107 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.03□□□□□ -2.08
VPS53Q5VIR6 MIR3198-2-201ENST00000577868 80 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 AC008507.4-201ENST00000585464 127 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 SNORA28-201ENST00000606769 126 ntBASIC2.03□□□□□ -2.08
VPS53Q5VIR6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.03□□□□□ -2.09
VPS53Q5VIR6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VPS53Q5VIR6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms