Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.07
LONRF3Q496Y0 Y_RNA.240-201ENST00000364469 95 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 SNORA16.1-201ENST00000364597 132 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 SNORA4.2-201ENST00000365313 147 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 HMGN1P7-201ENST00000491722 313 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 AC074198.2-201ENST00000508153 258 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 AL021707.8-201ENST00000609428 183 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 MIR8054-201ENST00000620877 86 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 U6.106-201ENST00000636360 105 ntBASIC2.09□□□□□ -2.07
LONRF3Q496Y0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
LONRF3Q496Y0 RNU6-578P-201ENST00000390980 103 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 AL606845.1-201ENST00000404881 255 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.08□□□□□ -2.08
LONRF3Q496Y0 MIR4422-201ENST00000581938 83 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 AC108706.1-201ENST00000611053 297 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 JPX_2.1-201ENST00000614161 69 ntBASIC2.08□□□□□ -2.08
LONRF3Q496Y0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.180-201ENST00000363867 113 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LONRF3Q496Y0 RNU6-440P-201ENST00000390882 105 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 SNORD11-201ENST00000459124 84 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.07□□□□□ -2.08
LONRF3Q496Y0 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 SNORA31.10-201ENST00000516482 106 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.07□□□□□ -2.08
LONRF3Q496Y0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.07□□□□□ -2.08
LONRF3Q496Y0 AL049861.1-201ENST00000603130 150 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 AL591926.4-201ENST00000616895 298 ntBASIC2.07□□□□□ -2.08
LONRF3Q496Y0 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
LONRF3Q496Y0 RNU6-275P-201ENST00000364910 107 ntBASIC2.06□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.06□□□□□ -2.08
LONRF3Q496Y0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.06□□□□□ -2.08
LONRF3Q496Y0 SNRPGP10-201ENST00000432323 225 ntBASIC2.06□□□□□ -2.08
LONRF3Q496Y0 RNU6-970P-201ENST00000516312 107 ntBASIC2.06□□□□□ -2.08
LONRF3Q496Y0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
LONRF3Q496Y0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LONRF3Q496Y0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.05□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 RNY3P5-201ENST00000384127 102 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 RNU6-950P-201ENST00000384651 107 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 AL603825.1-201ENST00000438481 80 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 STAG3L5P-204ENST00000443759 179 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 RNU6-561P-201ENST00000516222 102 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 AC109810.1-201ENST00000534066 224 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 uc_338.4-201ENST00000616635 176 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 WWP1P1-201ENST00000466609 2769 ntBASIC2.05□□□□□ -2.08
LONRF3Q496Y0 RNU6-312P-201ENST00000364629 107 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 SNORA12.1-201ENST00000390873 148 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
LONRF3Q496Y0 MLLT10P1-201ENST00000418346 262 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 AC023449.1-201ENST00000454464 154 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 SNORD68-201ENST00000363214 84 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 MIR522-201ENST00000385071 87 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.03□□□□□ -2.08
LONRF3Q496Y0 AL121914.1-201ENST00000450188 156 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 RNA5SP182-201ENST00000516064 82 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 RNA5SP458-201ENST00000516188 119 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 AC095038.3-201ENST00000634439 195 ntBASIC2.03□□□□□ -2.08
LONRF3Q496Y0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LONRF3Q496Y0 RNU6-728P-201ENST00000365375 104 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 SEPT7P4-201ENST00000437076 306 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 SNRPGP8-201ENST00000454064 226 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 OR9P1P-201ENST00000496431 281 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
LONRF3Q496Y0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LONRF3Q496Y0 SNORD45.3-201ENST00000363836 72 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 Y_RNA.441-201ENST00000384123 112 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 MIR15B-201ENST00000385045 98 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 RNU6-131P-201ENST00000391144 107 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 SNORA17.3-201ENST00000391159 129 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.01□□□□□ -2.09
LONRF3Q496Y0 SNORD77.4-201ENST00000516158 81 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.01□□□□□ -2.09
LONRF3Q496Y0 MIR4762-201ENST00000585261 75 ntBASIC2.01□□□□□ -2.09
LONRF3Q496Y0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LONRF3Q496Y0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2□□□□□ -2.09
LONRF3Q496Y0 U8.5-201ENST00000364528 136 ntBASIC2□□□□□ -2.09
LONRF3Q496Y0 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
LONRF3Q496Y0 Y_RNA.464-201ENST00000384282 110 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms