Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTC1Q2NKJ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 SNORD115-2-201ENST00000362842 82 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 SNORD115-20-201ENST00000365099 82 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 SNORA80E-201ENST00000384744 137 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 RNU6-871P-201ENST00000516122 100 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 RNU6-917P-201ENST00000516294 104 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 AP002004.2-201ENST00000531656 154 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 AC103810.6-201ENST00000606708 136 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
CTC1Q2NKJ3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 snoU2-30.2-201ENST00000362805 70 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 SNORD38.1-201ENST00000363863 68 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 Y_RNA.567-201ENST00000384736 106 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 AL445685.2-201ENST00000422551 342 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 MICF-203ENST00000432679 129 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 SNORA25.13-201ENST00000516395 103 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 RNU6-1015P-201ENST00000517121 99 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 AC026333.2-201ENST00000542164 106 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 MIR3945-201ENST00000581853 98 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 MIR4762-201ENST00000585261 75 ntBASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CTC1Q2NKJ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 RNU6-411P-201ENST00000384451 107 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 RNU7-34P-201ENST00000459394 64 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 SEM1P1-201ENST00000506694 209 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 AC090821.2-201ENST00000523552 176 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 AL513043.2-201ENST00000573941 143 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 AC020891.4-201ENST00000605745 93 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 AL137790.1-201ENST00000634283 177 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 U6.108-201ENST00000637764 58 ntBASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTC1Q2NKJ3 MAPK10-322ENST00000641485 4530 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 SNORA22.1-201ENST00000362701 134 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 SNORD115-39-201ENST00000363694 82 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 Y_RNA.205-201ENST00000364128 113 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 RNU6-1307P-201ENST00000391012 103 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 RPS29P28-201ENST00000446439 141 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 AC114811.1-201ENST00000507207 168 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 AC104027.1-201ENST00000521887 300 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 SNORA50A-202ENST00000629536 136 ntBASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTC1Q2NKJ3 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 MIR449A-201ENST00000362113 91 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 U8.5-201ENST00000364528 136 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 Y_RNA.386-201ENST00000383913 105 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 RPS27P29-201ENST00000463110 252 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 RNU7-2P-201ENST00000516096 62 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.5□□□□□ -1.85
CTC1Q2NKJ3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 SNORA25.6-201ENST00000364121 118 ntBASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 CD24P4-201ENST00000382840 243 ntBASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 MIR34C-201ENST00000384831 77 ntBASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 AC092185.1-201ENST00000491371 97 ntBASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 MIR3162-201ENST00000581818 82 ntBASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTC1Q2NKJ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU6-1319P-201ENST00000390855 104 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU6-747P-201ENST00000390928 104 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU6-241P-201ENST00000391148 104 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 SNORA40.18-201ENST00000391200 128 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU6-177P-201ENST00000411257 104 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 CKS1BP2-201ENST00000497342 240 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU6-1041P-201ENST00000516254 102 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 RNU1-142P-201ENST00000516682 145 ntBASIC3.48□□□□□ -1.85
CTC1Q2NKJ3 MIR5739-201ENST00000619803 80 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms