Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 RNU6-661P-201ENST00000362409 107 ntBASIC2.57□□□□□ -2
HDLBPQ00341 Y_RNA.272-201ENST00000364696 102 ntBASIC2.57□□□□□ -2
HDLBPQ00341 SNORD50B-201ENST00000364995 70 ntBASIC2.57□□□□□ -2
HDLBPQ00341 RPL23AP42-201ENST00000471152 471 ntBASIC2.57□□□□□ -2
HDLBPQ00341 RNU6-561P-201ENST00000516222 102 ntBASIC2.57□□□□□ -2
HDLBPQ00341 RNU6-504P-201ENST00000516568 104 ntBASIC2.57□□□□□ -2
HDLBPQ00341 MIR514B-201ENST00000516774 80 ntBASIC2.57□□□□□ -2
HDLBPQ00341 AC097639.2-201ENST00000603159 172 ntBASIC2.57□□□□□ -2
HDLBPQ00341 MTND1P7-201ENST00000632801 297 ntBASIC2.57□□□□□ -2
HDLBPQ00341 AC005336.3-201ENST00000623833 2679 ntBASIC2.56□□□□□ -2
HDLBPQ00341 RNU6-1123P-201ENST00000362347 106 ntBASIC2.56□□□□□ -2
HDLBPQ00341 Y_RNA.634-201ENST00000364811 113 ntBASIC2.56□□□□□ -2
HDLBPQ00341 U8.13-201ENST00000390842 128 ntBASIC2.56□□□□□ -2
HDLBPQ00341 CALM2P4-201ENST00000430810 426 ntBASIC2.56□□□□□ -2
HDLBPQ00341 RNA5SP233-201ENST00000459153 113 ntBASIC2.56□□□□□ -2
HDLBPQ00341 RNU7-12P-201ENST00000516030 62 ntBASIC2.56□□□□□ -2
HDLBPQ00341 MIR378D2-201ENST00000580636 98 ntBASIC2.56□□□□□ -2
HDLBPQ00341 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HDLBPQ00341 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.56□□□□□ -2
HDLBPQ00341 MIRLET7C-201ENST00000362160 84 ntBASIC2.55□□□□□ -2
HDLBPQ00341 MIR424-201ENST00000362227 98 ntBASIC2.55□□□□□ -2
HDLBPQ00341 SNORD38C-201ENST00000384381 69 ntBASIC2.55□□□□□ -2
HDLBPQ00341 Y_RNA.580-201ENST00000391004 95 ntBASIC2.55□□□□□ -2
HDLBPQ00341 U8.16-201ENST00000391279 133 ntBASIC2.55□□□□□ -2
HDLBPQ00341 RNU6-394P-201ENST00000410735 107 ntBASIC2.55□□□□□ -2
HDLBPQ00341 AC114811.1-201ENST00000507207 168 ntBASIC2.55□□□□□ -2
HDLBPQ00341 SNORD116-25-201ENST00000516517 92 ntBASIC2.55□□□□□ -2
HDLBPQ00341 AC022254.1-201ENST00000567857 235 ntBASIC2.55□□□□□ -2
HDLBPQ00341 MIR4299-201ENST00000577899 72 ntBASIC2.55□□□□□ -2
HDLBPQ00341 Y_RNA.521-201ENST00000384560 114 ntBASIC2.54□□□□□ -2
HDLBPQ00341 MIR660-201ENST00000385235 97 ntBASIC2.54□□□□□ -2
HDLBPQ00341 SNORD72-201ENST00000390994 80 ntBASIC2.54□□□□□ -2
HDLBPQ00341 RNU5E-9P-201ENST00000411164 104 ntBASIC2.54□□□□□ -2
HDLBPQ00341 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.54□□□□□ -2
HDLBPQ00341 SNORD3E-202ENST00000627253 216 ntBASIC2.54□□□□□ -2
HDLBPQ00341 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HDLBPQ00341 ZNF720P1-201ENST00000562403 1939 ntBASIC2.53□□□□□ -2
HDLBPQ00341 SNORD24-201ENST00000383884 75 ntBASIC2.53□□□□□ -2
HDLBPQ00341 RNU6-449P-201ENST00000383914 107 ntBASIC2.53□□□□□ -2
HDLBPQ00341 Y_RNA.486-201ENST00000384398 107 ntBASIC2.53□□□□□ -2
HDLBPQ00341 SNORA26.9-201ENST00000391322 122 ntBASIC2.53□□□□□ -2
HDLBPQ00341 SNORA44.1-201ENST00000517031 108 ntBASIC2.53□□□□□ -2
HDLBPQ00341 MIR3144-201ENST00000579460 79 ntBASIC2.53□□□□□ -2
HDLBPQ00341 AC006441.5-201ENST00000612680 209 ntBASIC2.53□□□□□ -2
HDLBPQ00341 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HDLBPQ00341 MIR452-201ENST00000385020 85 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HDLBPQ00341 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 JTBP1-201ENST00000441314 247 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 SNRPGP13-201ENST00000442212 177 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 AC099513.1-201ENST00000490423 301 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 RNU7-121P-201ENST00000516604 62 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 AL627230.6-201ENST00000611129 280 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
HDLBPQ00341 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.51□□□□□ -2.01
HDLBPQ00341 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.51□□□□□ -2.01
HDLBPQ00341 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HDLBPQ00341 MIR1267-201ENST00000408723 78 ntBASIC2.51□□□□□ -2.01
HDLBPQ00341 AL356379.1-201ENST00000414105 126 ntBASIC2.51□□□□□ -2.01
HDLBPQ00341 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.51□□□□□ -2.01
HDLBPQ00341 MIR3646-201ENST00000578301 84 ntBASIC2.51□□□□□ -2.01
HDLBPQ00341 DNAJC19P2-201ENST00000593340 302 ntBASIC2.51□□□□□ -2.01
HDLBPQ00341 SNORA25.7-201ENST00000364375 127 ntBASIC2.5□□□□□ -2.01
HDLBPQ00341 Y_RNA.393-201ENST00000383936 102 ntBASIC2.5□□□□□ -2.01
HDLBPQ00341 AL603825.1-201ENST00000438481 80 ntBASIC2.5□□□□□ -2.01
HDLBPQ00341 AC079804.2-201ENST00000490376 200 ntBASIC2.5□□□□□ -2.01
HDLBPQ00341 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.5□□□□□ -2.01
HDLBPQ00341 AL359851.1-201ENST00000569460 4997 ntBASIC2.5□□□□□ -2.01
HDLBPQ00341 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HDLBPQ00341 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
HDLBPQ00341 Y_RNA.91-201ENST00000363042 107 ntBASIC2.49□□□□□ -2.01
HDLBPQ00341 RNU6-597P-201ENST00000365620 102 ntBASIC2.49□□□□□ -2.01
HDLBPQ00341 RNA5SP182-201ENST00000516064 82 ntBASIC2.49□□□□□ -2.01
HDLBPQ00341 RNU6-295P-201ENST00000516901 104 ntBASIC2.49□□□□□ -2.01
HDLBPQ00341 MIR8074-201ENST00000615081 81 ntBASIC2.49□□□□□ -2.01
HDLBPQ00341 Y_RNA.8-201ENST00000362353 102 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 RNU6-888P-201ENST00000363010 101 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 RNU6-268P-201ENST00000364174 107 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 SNORD116-18-201ENST00000383961 92 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 RNU6-804P-201ENST00000384286 107 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 RNU6-1116P-201ENST00000517269 99 ntBASIC2.48□□□□□ -2.01
HDLBPQ00341 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDLBPQ00341 AC004965.1-201ENST00000413033 213 ntBASIC2.47□□□□□ -2.01
HDLBPQ00341 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.47□□□□□ -2.01
HDLBPQ00341 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HDLBPQ00341 Y_RNA.66-201ENST00000362862 102 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 RNU6-199P-201ENST00000362954 107 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 Y_RNA.542-201ENST00000384641 111 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HDLBPQ00341 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HDLBPQ00341 SNORD37.2-201ENST00000391075 66 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 AC019129.1-201ENST00000403786 261 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 MIR548O-201ENST00000408583 114 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 RNU6-693P-201ENST00000516134 107 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 RNU6-548P-201ENST00000517083 115 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 AL353997.5-201ENST00000618886 171 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 AC021753.1-201ENST00000635724 168 ntBASIC2.46□□□□□ -2.02
HDLBPQ00341 MIR6844-201ENST00000637122 62 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms