Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 LINC02471-203ENST00000641941 4752 ntBASIC4.17□□□□□ -1.74
ATN1P54259 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
ATN1P54259 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
ATN1P54259 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.17□□□□□ -1.74
ATN1P54259 RNU6-330P-201ENST00000363015 107 ntBASIC4.17□□□□□ -1.74
ATN1P54259 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ATN1P54259 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.17□□□□□ -1.74
ATN1P54259 SNRPGP12-201ENST00000449481 213 ntBASIC4.17□□□□□ -1.74
ATN1P54259 HSPE1P24-201ENST00000450782 238 ntBASIC4.17□□□□□ -1.74
ATN1P54259 SNORD105B-201ENST00000458770 79 ntBASIC4.17□□□□□ -1.74
ATN1P54259 RPS26P15-201ENST00000488067 348 ntBASIC4.17□□□□□ -1.74
ATN1P54259 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.17□□□□□ -1.74
ATN1P54259 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.17□□□□□ -1.74
ATN1P54259 AC133485.1-201ENST00000567176 124 ntBASIC4.17□□□□□ -1.74
ATN1P54259 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.17□□□□□ -1.74
ATN1P54259 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
ATN1P54259 MIR5739-201ENST00000619803 80 ntBASIC4.17□□□□□ -1.74
ATN1P54259 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATN1P54259 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ATN1P54259 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATN1P54259 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ATN1P54259 SNORA38.1-201ENST00000364172 131 ntBASIC4.16□□□□□ -1.74
ATN1P54259 RNU6-154P-201ENST00000384306 106 ntBASIC4.16□□□□□ -1.74
ATN1P54259 RNU2-48P-201ENST00000410694 191 ntBASIC4.16□□□□□ -1.74
ATN1P54259 HMGN2P16-201ENST00000456802 261 ntBASIC4.16□□□□□ -1.74
ATN1P54259 MIR2114-201ENST00000516645 80 ntBASIC4.16□□□□□ -1.74
ATN1P54259 SNORD14A-201ENST00000606526 91 ntBASIC4.16□□□□□ -1.74
ATN1P54259 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.16□□□□□ -1.74
ATN1P54259 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATN1P54259 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
ATN1P54259 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
ATN1P54259 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.15□□□□□ -1.74
ATN1P54259 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ATN1P54259 PWAR6-201ENST00000552334 4618 ntBASIC4.15□□□□□ -1.74
ATN1P54259 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATN1P54259 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATN1P54259 SNORD9-201ENST00000362566 104 ntBASIC4.15□□□□□ -1.75
ATN1P54259 SNORA38-201ENST00000363946 132 ntBASIC4.15□□□□□ -1.75
ATN1P54259 RNU6-283P-201ENST00000364788 107 ntBASIC4.15□□□□□ -1.75
ATN1P54259 RNU6-132P-201ENST00000383863 107 ntBASIC4.15□□□□□ -1.75
ATN1P54259 MIR199A2-201ENST00000385289 110 ntBASIC4.15□□□□□ -1.75
ATN1P54259 RNA5SP38-201ENST00000410750 119 ntBASIC4.15□□□□□ -1.75
ATN1P54259 snoU13.16-201ENST00000459350 104 ntBASIC4.15□□□□□ -1.75
ATN1P54259 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.15□□□□□ -1.75
ATN1P54259 MIR8054-201ENST00000620877 86 ntBASIC4.15□□□□□ -1.75
ATN1P54259 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
ATN1P54259 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATN1P54259 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.14□□□□□ -1.75
ATN1P54259 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATN1P54259 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.14□□□□□ -1.75
ATN1P54259 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATN1P54259 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
ATN1P54259 RNU6-829P-201ENST00000363700 112 ntBASIC4.14□□□□□ -1.75
ATN1P54259 RNU1-33P-201ENST00000364249 162 ntBASIC4.14□□□□□ -1.75
ATN1P54259 RNY1P2-201ENST00000364820 117 ntBASIC4.14□□□□□ -1.75
ATN1P54259 Y_RNA.500-201ENST00000384466 111 ntBASIC4.14□□□□□ -1.75
ATN1P54259 MIR95-201ENST00000385072 81 ntBASIC4.14□□□□□ -1.75
ATN1P54259 MIR516B2-201ENST00000385190 85 ntBASIC4.14□□□□□ -1.75
ATN1P54259 MIR136-201ENST00000385207 82 ntBASIC4.14□□□□□ -1.75
ATN1P54259 AL159169.1-201ENST00000421119 127 ntBASIC4.14□□□□□ -1.75
ATN1P54259 AC017083.1-201ENST00000428093 483 ntBASIC4.14□□□□□ -1.75
ATN1P54259 AC005326.1-201ENST00000429197 123 ntBASIC4.14□□□□□ -1.75
ATN1P54259 AL360157.1-201ENST00000565962 87 ntBASIC4.14□□□□□ -1.75
ATN1P54259 MIR4513-201ENST00000581077 86 ntBASIC4.14□□□□□ -1.75
ATN1P54259 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
ATN1P54259 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATN1P54259 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATN1P54259 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 RNU1-23P-201ENST00000363361 144 ntBASIC4.13□□□□□ -1.75
ATN1P54259 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 MIR452-201ENST00000385020 85 ntBASIC4.13□□□□□ -1.75
ATN1P54259 AC005908.1-201ENST00000468701 347 ntBASIC4.13□□□□□ -1.75
ATN1P54259 RNU6-850P-201ENST00000516934 103 ntBASIC4.13□□□□□ -1.75
ATN1P54259 Y_RNA.722-201ENST00000517279 114 ntBASIC4.13□□□□□ -1.75
ATN1P54259 AL137849.1-201ENST00000604767 169 ntBASIC4.13□□□□□ -1.75
ATN1P54259 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ATN1P54259 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
ATN1P54259 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ATN1P54259 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ATN1P54259 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.12□□□□□ -1.75
ATN1P54259 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
ATN1P54259 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATN1P54259 RNU6-862P-201ENST00000362804 105 ntBASIC4.12□□□□□ -1.75
ATN1P54259 Y_RNA.537-201ENST00000384626 109 ntBASIC4.12□□□□□ -1.75
ATN1P54259 RNU6-1067P-201ENST00000384752 107 ntBASIC4.12□□□□□ -1.75
ATN1P54259 RNA5SP109-201ENST00000391010 116 ntBASIC4.12□□□□□ -1.75
ATN1P54259 RNA5SP252-201ENST00000391131 119 ntBASIC4.12□□□□□ -1.75
ATN1P54259 CYCSP4-201ENST00000429682 331 ntBASIC4.12□□□□□ -1.75
ATN1P54259 CYP2C59P-201ENST00000457790 269 ntBASIC4.12□□□□□ -1.75
ATN1P54259 UBE2DNL-203ENST00000474922 222 ntBASIC4.12□□□□□ -1.75
ATN1P54259 SCARNA17.1-201ENST00000516211 143 ntBASIC4.12□□□□□ -1.75
ATN1P54259 SCARNA17.2-201ENST00000516334 143 ntBASIC4.12□□□□□ -1.75
ATN1P54259 MIR548AR-201ENST00000582191 57 ntBASIC4.12□□□□□ -1.75
ATN1P54259 SNORA62.6-201ENST00000606322 83 ntBASIC4.12□□□□□ -1.75
ATN1P54259 MIR8053-201ENST00000613344 75 ntBASIC4.12□□□□□ -1.75
ATN1P54259 SCARNA17.4-201ENST00000614296 143 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms