Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 SNORD53-201ENST00000579969 78 ntBASIC3.98□□□□□ -1.77
HDGFP51858 AC078899.2-201ENST00000595282 212 ntBASIC3.98□□□□□ -1.77
HDGFP51858 MIR338-201ENST00000636369 67 ntBASIC3.98□□□□□ -1.77
HDGFP51858 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HDGFP51858 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.97□□□□□ -1.77
HDGFP51858 RNA5SP383-201ENST00000362934 120 ntBASIC3.97□□□□□ -1.77
HDGFP51858 RNU6-776P-201ENST00000364403 104 ntBASIC3.97□□□□□ -1.77
HDGFP51858 RNU6-1022P-201ENST00000365049 104 ntBASIC3.97□□□□□ -1.77
HDGFP51858 SNORA18-201ENST00000384416 132 ntBASIC3.97□□□□□ -1.77
HDGFP51858 MIR218-1-201ENST00000384999 110 ntBASIC3.97□□□□□ -1.77
HDGFP51858 Y_RNA.620-201ENST00000411009 88 ntBASIC3.97□□□□□ -1.77
HDGFP51858 AC008413.1-201ENST00000511864 177 ntBASIC3.97□□□□□ -1.77
HDGFP51858 RNA5SP24-201ENST00000516478 95 ntBASIC3.97□□□□□ -1.77
HDGFP51858 RNA5SP148-201ENST00000516527 94 ntBASIC3.97□□□□□ -1.77
HDGFP51858 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.97□□□□□ -1.77
HDGFP51858 MIR4778-201ENST00000577635 80 ntBASIC3.97□□□□□ -1.77
HDGFP51858 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.97□□□□□ -1.77
HDGFP51858 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HDGFP51858 AC002546.1-201ENST00000588041 2504 ntBASIC3.97□□□□□ -1.77
HDGFP51858 RNU6-652P-201ENST00000365488 107 ntBASIC3.96□□□□□ -1.78
HDGFP51858 Y_RNA.494-201ENST00000384432 111 ntBASIC3.96□□□□□ -1.78
HDGFP51858 RNY1P4-201ENST00000384595 115 ntBASIC3.96□□□□□ -1.78
HDGFP51858 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.96□□□□□ -1.78
HDGFP51858 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.96□□□□□ -1.78
HDGFP51858 AC009969.1-201ENST00000438726 172 ntBASIC3.96□□□□□ -1.78
HDGFP51858 AC006539.3-201ENST00000454258 129 ntBASIC3.96□□□□□ -1.78
HDGFP51858 SNORD45.4-201ENST00000516629 73 ntBASIC3.96□□□□□ -1.78
HDGFP51858 SNORA64.4-201ENST00000516632 81 ntBASIC3.96□□□□□ -1.78
HDGFP51858 AC019288.1-201ENST00000557918 224 ntBASIC3.96□□□□□ -1.78
HDGFP51858 AC006111.3-201ENST00000622137 383 ntBASIC3.96□□□□□ -1.78
HDGFP51858 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
HDGFP51858 Y_RNA.95-201ENST00000363079 95 ntBASIC3.95□□□□□ -1.78
HDGFP51858 RNU1-23P-201ENST00000363361 144 ntBASIC3.95□□□□□ -1.78
HDGFP51858 RNU2-48P-201ENST00000410694 191 ntBASIC3.95□□□□□ -1.78
HDGFP51858 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.95□□□□□ -1.78
HDGFP51858 RPL23AP63-201ENST00000498752 471 ntBASIC3.95□□□□□ -1.78
HDGFP51858 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.95□□□□□ -1.78
HDGFP51858 MIR4668-201ENST00000582284 70 ntBASIC3.95□□□□□ -1.78
HDGFP51858 MIR4762-201ENST00000585261 75 ntBASIC3.95□□□□□ -1.78
HDGFP51858 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.95□□□□□ -1.78
HDGFP51858 MIR4662A-201ENST00000637499 67 ntBASIC3.95□□□□□ -1.78
HDGFP51858 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.95□□□□□ -1.78
HDGFP51858 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDGFP51858 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDGFP51858 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HDGFP51858 RNU1-105P-201ENST00000363470 161 ntBASIC3.94□□□□□ -1.78
HDGFP51858 Y_RNA.191-201ENST00000363972 113 ntBASIC3.94□□□□□ -1.78
HDGFP51858 RNU6-1083P-201ENST00000384022 107 ntBASIC3.94□□□□□ -1.78
HDGFP51858 AC073261.1-201ENST00000429409 121 ntBASIC3.94□□□□□ -1.78
HDGFP51858 RNU7-170P-201ENST00000459303 61 ntBASIC3.94□□□□□ -1.78
HDGFP51858 RNA5SP309-201ENST00000516670 106 ntBASIC3.94□□□□□ -1.78
HDGFP51858 RNU1-142P-201ENST00000516682 145 ntBASIC3.94□□□□□ -1.78
HDGFP51858 AP002004.2-201ENST00000531656 154 ntBASIC3.94□□□□□ -1.78
HDGFP51858 AC006160.2-201ENST00000637708 154 ntBASIC3.94□□□□□ -1.78
HDGFP51858 GABRG2-229ENST00000641017 3628 ntBASIC3.94□□□□□ -1.78
HDGFP51858 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
HDGFP51858 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.93□□□□□ -1.78
HDGFP51858 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HDGFP51858 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDGFP51858 snoU2-30.1-201ENST00000365012 70 ntBASIC3.93□□□□□ -1.78
HDGFP51858 SNORD38C-201ENST00000384381 69 ntBASIC3.93□□□□□ -1.78
HDGFP51858 MIR512-1-201ENST00000384913 84 ntBASIC3.93□□□□□ -1.78
HDGFP51858 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HDGFP51858 RNU6-887P-201ENST00000410660 100 ntBASIC3.93□□□□□ -1.78
HDGFP51858 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.93□□□□□ -1.78
HDGFP51858 SNORA31.1-201ENST00000515993 133 ntBASIC3.93□□□□□ -1.78
HDGFP51858 SNORA31.5-201ENST00000516190 133 ntBASIC3.93□□□□□ -1.78
HDGFP51858 CTSLP2-204ENST00000629029 392 ntBASIC3.93□□□□□ -1.78
HDGFP51858 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDGFP51858 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDGFP51858 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.92□□□□□ -1.78
HDGFP51858 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
HDGFP51858 SNORD45B-201ENST00000364617 72 ntBASIC3.92□□□□□ -1.78
HDGFP51858 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDGFP51858 Y_RNA.426-201ENST00000384068 113 ntBASIC3.92□□□□□ -1.78
HDGFP51858 MIR504-201ENST00000385065 83 ntBASIC3.92□□□□□ -1.78
HDGFP51858 RNU11-5P-201ENST00000391216 129 ntBASIC3.92□□□□□ -1.78
HDGFP51858 MIR889-201ENST00000401280 79 ntBASIC3.92□□□□□ -1.78
HDGFP51858 Y_RNA.611-201ENST00000410682 108 ntBASIC3.92□□□□□ -1.78
HDGFP51858 POLR2J4-204ENST00000418424 324 ntBASIC3.92□□□□□ -1.78
HDGFP51858 AC087499.4-201ENST00000448505 178 ntBASIC3.92□□□□□ -1.78
HDGFP51858 Y_RNA.659-201ENST00000515994 113 ntBASIC3.92□□□□□ -1.78
HDGFP51858 Y_RNA.705-201ENST00000516862 110 ntBASIC3.92□□□□□ -1.78
HDGFP51858 RNU6-1258P-201ENST00000516911 111 ntBASIC3.92□□□□□ -1.78
HDGFP51858 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDGFP51858 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.91□□□□□ -1.78
HDGFP51858 Y_RNA.4-201ENST00000362333 112 ntBASIC3.91□□□□□ -1.78
HDGFP51858 U8.5-201ENST00000364528 136 ntBASIC3.91□□□□□ -1.78
HDGFP51858 SNORA80E-201ENST00000384744 137 ntBASIC3.91□□□□□ -1.78
HDGFP51858 snoU13.26-201ENST00000459452 105 ntBASIC3.91□□□□□ -1.78
HDGFP51858 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.91□□□□□ -1.78
HDGFP51858 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.91□□□□□ -1.78
HDGFP51858 MIR7843-201ENST00000622274 79 ntBASIC3.91□□□□□ -1.78
HDGFP51858 MIR26A1-201ENST00000362205 77 ntBASIC3.9□□□□□ -1.79
HDGFP51858 Y_RNA.171-201ENST00000363760 102 ntBASIC3.9□□□□□ -1.79
HDGFP51858 RNU6-616P-201ENST00000384353 107 ntBASIC3.9□□□□□ -1.79
HDGFP51858 SNORA8-201ENST00000384574 139 ntBASIC3.9□□□□□ -1.79
HDGFP51858 AL627390.1-201ENST00000396055 340 ntBASIC3.9□□□□□ -1.79
HDGFP51858 AL022718.1-201ENST00000412004 84 ntBASIC3.9□□□□□ -1.79
HDGFP51858 AL161788.1-201ENST00000441805 169 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms