Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNU6-442P-201ENST00000383968 104 ntBASIC0.86□□□□□ -2.27
GPC3P51654 AL590004.1-201ENST00000405321 300 ntBASIC0.86□□□□□ -2.27
GPC3P51654 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
GPC3P51654 AC245047.8-201ENST00000456455 284 ntBASIC0.86□□□□□ -2.27
GPC3P51654 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.86□□□□□ -2.27
GPC3P51654 AC037487.3-201ENST00000606668 112 ntBASIC0.86□□□□□ -2.27
GPC3P51654 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.86□□□□□ -2.27
GPC3P51654 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
GPC3P51654 AC134503.1-201ENST00000633048 54 ntBASIC0.86□□□□□ -2.27
GPC3P51654 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
GPC3P51654 Y_RNA.136-201ENST00000363444 102 ntBASIC0.85□□□□□ -2.27
GPC3P51654 SNORD113-8-201ENST00000363497 74 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNA5SP48-201ENST00000363969 126 ntBASIC0.85□□□□□ -2.27
GPC3P51654 U8.7-201ENST00000364940 136 ntBASIC0.85□□□□□ -2.27
GPC3P51654 SNORD50B-201ENST00000364995 70 ntBASIC0.85□□□□□ -2.27
GPC3P51654 Y_RNA.389-201ENST00000383924 113 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-144P-201ENST00000383951 107 ntBASIC0.85□□□□□ -2.27
GPC3P51654 Y_RNA.419-201ENST00000384041 102 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-1067P-201ENST00000384752 107 ntBASIC0.85□□□□□ -2.27
GPC3P51654 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
GPC3P51654 MIR520C-201ENST00000385005 87 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-823P-201ENST00000391042 103 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.85□□□□□ -2.27
GPC3P51654 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
GPC3P51654 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
GPC3P51654 AC023449.1-201ENST00000454464 154 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-437P-201ENST00000459408 95 ntBASIC0.85□□□□□ -2.27
GPC3P51654 AC117454.1-201ENST00000491120 168 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-1143P-201ENST00000516125 104 ntBASIC0.85□□□□□ -2.27
GPC3P51654 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
GPC3P51654 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
GPC3P51654 PART1_1.1-201ENST00000611761 217 ntBASIC0.85□□□□□ -2.27
GPC3P51654 AC068700.1-201ENST00000565862 3754 ntBASIC0.85□□□□□ -2.27
GPC3P51654 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
GPC3P51654 Y_RNA.61-201ENST00000362835 102 ntBASIC0.84□□□□□ -2.27
GPC3P51654 RNU6-899P-201ENST00000363947 107 ntBASIC0.84□□□□□ -2.27
GPC3P51654 SNORA72.4-201ENST00000384174 132 ntBASIC0.84□□□□□ -2.27
GPC3P51654 SNORD115-46-201ENST00000390982 71 ntBASIC0.84□□□□□ -2.27
GPC3P51654 RNU6-130P-201ENST00000411112 103 ntBASIC0.84□□□□□ -2.27
GPC3P51654 PMCHL1-202ENST00000423102 261 ntBASIC0.84□□□□□ -2.27
GPC3P51654 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
GPC3P51654 RNU7-21P-201ENST00000459430 62 ntBASIC0.84□□□□□ -2.27
GPC3P51654 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
GPC3P51654 SNORA40.15-201ENST00000516884 107 ntBASIC0.84□□□□□ -2.27
GPC3P51654 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
GPC3P51654 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
GPC3P51654 MIR4300-201ENST00000581016 96 ntBASIC0.84□□□□□ -2.27
GPC3P51654 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
GPC3P51654 PRELID3BP2-201ENST00000605362 201 ntBASIC0.84□□□□□ -2.27
GPC3P51654 AL391903.3-201ENST00000612158 163 ntBASIC0.84□□□□□ -2.27
GPC3P51654 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
GPC3P51654 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
GPC3P51654 RNU4-80P-201ENST00000363200 141 ntBASIC0.83□□□□□ -2.28
GPC3P51654 Y_RNA.276-201ENST00000364732 109 ntBASIC0.83□□□□□ -2.28
GPC3P51654 Y_RNA.370-201ENST00000365589 108 ntBASIC0.83□□□□□ -2.28
GPC3P51654 Y_RNA.535-201ENST00000384612 99 ntBASIC0.83□□□□□ -2.28
GPC3P51654 Y_RNA.569-201ENST00000384749 103 ntBASIC0.83□□□□□ -2.28
GPC3P51654 MIR516B2-201ENST00000385190 85 ntBASIC0.83□□□□□ -2.28
GPC3P51654 SNORA36B-201ENST00000410438 131 ntBASIC0.83□□□□□ -2.28
GPC3P51654 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.83□□□□□ -2.28
GPC3P51654 MIR3145-201ENST00000580727 82 ntBASIC0.83□□□□□ -2.28
GPC3P51654 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.83□□□□□ -2.28
GPC3P51654 AL096861.1-201ENST00000610899 123 ntBASIC0.83□□□□□ -2.28
GPC3P51654 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
GPC3P51654 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
GPC3P51654 Y_RNA.148-201ENST00000363557 117 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU6-1209P-201ENST00000363655 107 ntBASIC0.82□□□□□ -2.28
GPC3P51654 Y_RNA.813-201ENST00000364639 102 ntBASIC0.82□□□□□ -2.28
GPC3P51654 SNORA53-201ENST00000391141 249 ntBASIC0.82□□□□□ -2.28
GPC3P51654 Y_RNA.645-201ENST00000391229 102 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU7-141P-201ENST00000459304 62 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU6-191P-201ENST00000516295 94 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU6-1046P-201ENST00000516538 107 ntBASIC0.82□□□□□ -2.28
GPC3P51654 RNU6-897P-201ENST00000517135 105 ntBASIC0.82□□□□□ -2.28
GPC3P51654 MIR4764-201ENST00000580680 88 ntBASIC0.82□□□□□ -2.28
GPC3P51654 AL355297.3-201ENST00000604082 446 ntBASIC0.82□□□□□ -2.28
GPC3P51654 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
GPC3P51654 RNA5SP264-201ENST00000363115 107 ntBASIC0.81□□□□□ -2.28
GPC3P51654 Y_RNA.158-201ENST00000363651 101 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RNU1-133P-201ENST00000364867 167 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RNU6-514P-201ENST00000384208 107 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RNU6-308P-201ENST00000390957 107 ntBASIC0.81□□□□□ -2.28
GPC3P51654 Y_RNA.581-201ENST00000391017 97 ntBASIC0.81□□□□□ -2.28
GPC3P51654 MIR548P-201ENST00000408336 84 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RPS26P48-201ENST00000491713 339 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
GPC3P51654 RNU11-2P-201ENST00000516898 142 ntBASIC0.81□□□□□ -2.28
GPC3P51654 SNORA18.7-201ENST00000516910 131 ntBASIC0.81□□□□□ -2.28
GPC3P51654 AL512605.2-201ENST00000592972 256 ntBASIC0.81□□□□□ -2.28
GPC3P51654 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
GPC3P51654 Y_RNA.31-201ENST00000362574 102 ntBASIC0.8□□□□□ -2.28
GPC3P51654 RNU6-797P-201ENST00000363101 109 ntBASIC0.8□□□□□ -2.28
GPC3P51654 Y_RNA.286-201ENST00000364813 102 ntBASIC0.8□□□□□ -2.28
GPC3P51654 Y_RNA.455-201ENST00000384230 98 ntBASIC0.8□□□□□ -2.28
GPC3P51654 RNU6-474P-201ENST00000384243 107 ntBASIC0.8□□□□□ -2.28
GPC3P51654 Y_RNA.602-201ENST00000410535 92 ntBASIC0.8□□□□□ -2.28
GPC3P51654 SNORD123-201ENST00000459473 70 ntBASIC0.8□□□□□ -2.28
GPC3P51654 RNU6-397P-201ENST00000516226 104 ntBASIC0.8□□□□□ -2.28
GPC3P51654 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms