Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
THBS4P35443 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.91□□□□□ -2.1
THBS4P35443 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
THBS4P35443 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
THBS4P35443 RNU6-768P-201ENST00000384683 107 ntBASIC1.91□□□□□ -2.1
THBS4P35443 SNORA12.1-201ENST00000390873 148 ntBASIC1.91□□□□□ -2.1
THBS4P35443 SNORA48.3-201ENST00000391081 134 ntBASIC1.91□□□□□ -2.1
THBS4P35443 RN7SKP192-201ENST00000411291 327 ntBASIC1.91□□□□□ -2.1
THBS4P35443 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
THBS4P35443 Pinc.1-201ENST00000616452 154 ntBASIC1.91□□□□□ -2.1
THBS4P35443 AL591926.4-201ENST00000616895 298 ntBASIC1.91□□□□□ -2.1
THBS4P35443 SNORD68-201ENST00000363214 84 ntBASIC1.9□□□□□ -2.11
THBS4P35443 Y_RNA.265-201ENST00000364677 108 ntBASIC1.9□□□□□ -2.11
THBS4P35443 RNU6-440P-201ENST00000390882 105 ntBASIC1.9□□□□□ -2.11
THBS4P35443 SNORA75.5-201ENST00000391291 81 ntBASIC1.9□□□□□ -2.11
THBS4P35443 RPL23AP6-201ENST00000446637 472 ntBASIC1.9□□□□□ -2.11
THBS4P35443 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
THBS4P35443 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
THBS4P35443 RNA5SP153-201ENST00000516498 76 ntBASIC1.9□□□□□ -2.11
THBS4P35443 AC090142.3-201ENST00000519012 385 ntBASIC1.9□□□□□ -2.11
THBS4P35443 AL160236.1-201ENST00000556317 195 ntBASIC1.9□□□□□ -2.11
THBS4P35443 MIR4648-201ENST00000580107 72 ntBASIC1.9□□□□□ -2.11
THBS4P35443 AC087685.1-201ENST00000587507 141 ntBASIC1.9□□□□□ -2.11
THBS4P35443 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.9□□□□□ -2.11
THBS4P35443 SNORA25.7-201ENST00000364375 127 ntBASIC1.89□□□□□ -2.11
THBS4P35443 RNU6-1138P-201ENST00000365359 106 ntBASIC1.89□□□□□ -2.11
THBS4P35443 Y_RNA.568-201ENST00000384742 113 ntBASIC1.89□□□□□ -2.11
THBS4P35443 MIR569-201ENST00000385228 96 ntBASIC1.89□□□□□ -2.11
THBS4P35443 RN7SKP200-201ENST00000410564 320 ntBASIC1.89□□□□□ -2.11
THBS4P35443 RNU6-365P-201ENST00000517113 106 ntBASIC1.89□□□□□ -2.11
THBS4P35443 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.89□□□□□ -2.11
THBS4P35443 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
THBS4P35443 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.89□□□□□ -2.11
THBS4P35443 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
THBS4P35443 Y_RNA.91-201ENST00000363042 107 ntBASIC1.88□□□□□ -2.11
THBS4P35443 Y_RNA.634-201ENST00000364811 113 ntBASIC1.88□□□□□ -2.11
THBS4P35443 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
THBS4P35443 MIR1261-201ENST00000408659 82 ntBASIC1.88□□□□□ -2.11
THBS4P35443 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
THBS4P35443 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.88□□□□□ -2.11
THBS4P35443 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.88□□□□□ -2.11
THBS4P35443 NDUFA4P2-201ENST00000489989 244 ntBASIC1.88□□□□□ -2.11
THBS4P35443 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
THBS4P35443 SCARNA16.3-201ENST00000516595 184 ntBASIC1.88□□□□□ -2.11
THBS4P35443 RNU7-28P-201ENST00000516759 62 ntBASIC1.88□□□□□ -2.11
THBS4P35443 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.88□□□□□ -2.11
THBS4P35443 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
THBS4P35443 AC120024.3-201ENST00000603167 156 ntBASIC1.88□□□□□ -2.11
THBS4P35443 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
THBS4P35443 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
THBS4P35443 RNU6-818P-201ENST00000364837 108 ntBASIC1.87□□□□□ -2.11
THBS4P35443 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
THBS4P35443 RNU6-1031P-201ENST00000384773 107 ntBASIC1.87□□□□□ -2.11
THBS4P35443 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
THBS4P35443 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
THBS4P35443 RNA5SP482-201ENST00000391269 118 ntBASIC1.87□□□□□ -2.11
THBS4P35443 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.87□□□□□ -2.11
THBS4P35443 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
THBS4P35443 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.87□□□□□ -2.11
THBS4P35443 STAG3L5P-204ENST00000443759 179 ntBASIC1.87□□□□□ -2.11
THBS4P35443 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
THBS4P35443 AC008507.4-201ENST00000585464 127 ntBASIC1.87□□□□□ -2.11
THBS4P35443 SNORA28-201ENST00000606769 126 ntBASIC1.87□□□□□ -2.11
THBS4P35443 AL627230.6-201ENST00000611129 280 ntBASIC1.87□□□□□ -2.11
THBS4P35443 AC010332.2-201ENST00000613083 1904 ntBASIC1.86□□□□□ -2.11
THBS4P35443 ICE2P2-201ENST00000483823 2787 ntBASIC1.86□□□□□ -2.11
THBS4P35443 RNU6-1084P-201ENST00000362498 107 ntBASIC1.86□□□□□ -2.11
THBS4P35443 SNORD14E-201ENST00000364009 85 ntBASIC1.86□□□□□ -2.11
THBS4P35443 RNU6-597P-201ENST00000365620 102 ntBASIC1.86□□□□□ -2.11
THBS4P35443 SNORA40-201ENST00000388090 126 ntBASIC1.86□□□□□ -2.11
THBS4P35443 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.86□□□□□ -2.11
THBS4P35443 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
THBS4P35443 RNU7-34P-201ENST00000459394 64 ntBASIC1.86□□□□□ -2.11
THBS4P35443 AC097639.2-201ENST00000603159 172 ntBASIC1.86□□□□□ -2.11
THBS4P35443 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
THBS4P35443 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
THBS4P35443 RNU6-661P-201ENST00000362409 107 ntBASIC1.85□□□□□ -2.11
THBS4P35443 snoU2-30.1-201ENST00000365012 70 ntBASIC1.85□□□□□ -2.11
THBS4P35443 Y_RNA.420-201ENST00000384043 110 ntBASIC1.85□□□□□ -2.11
THBS4P35443 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
THBS4P35443 MIR522-201ENST00000385071 87 ntBASIC1.85□□□□□ -2.11
THBS4P35443 AL034345.1-201ENST00000407768 123 ntBASIC1.85□□□□□ -2.11
THBS4P35443 RNU6-588P-201ENST00000410281 105 ntBASIC1.85□□□□□ -2.11
THBS4P35443 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.85□□□□□ -2.11
THBS4P35443 AL606753.1-201ENST00000427435 87 ntBASIC1.85□□□□□ -2.11
THBS4P35443 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
THBS4P35443 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
THBS4P35443 AC099513.1-201ENST00000490423 301 ntBASIC1.85□□□□□ -2.11
THBS4P35443 RNA5SP272-201ENST00000516095 111 ntBASIC1.85□□□□□ -2.11
THBS4P35443 RNU6-504P-201ENST00000516568 104 ntBASIC1.85□□□□□ -2.11
THBS4P35443 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
THBS4P35443 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
THBS4P35443 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
THBS4P35443 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
THBS4P35443 RNU6-978P-201ENST00000364371 103 ntBASIC1.84□□□□□ -2.11
THBS4P35443 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
THBS4P35443 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
THBS4P35443 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
THBS4P35443 SNORA20-201ENST00000384662 132 ntBASIC1.84□□□□□ -2.11
THBS4P35443 SNORD72-201ENST00000390994 80 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms