Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC008507.4-201ENST00000585464 127 ntBASIC3.13□□□□□ -1.91
RXRBP28702 AL359821.1-201ENST00000605519 182 ntBASIC3.13□□□□□ -1.91
RXRBP28702 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.13□□□□□ -1.91
RXRBP28702 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
RXRBP28702 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RXRBP28702 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RXRBP28702 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RXRBP28702 Y_RNA.253-201ENST00000364562 112 ntBASIC3.12□□□□□ -1.91
RXRBP28702 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.12□□□□□ -1.91
RXRBP28702 RPL39P34-201ENST00000477141 156 ntBASIC3.12□□□□□ -1.91
RXRBP28702 HMGN1P7-201ENST00000491722 313 ntBASIC3.12□□□□□ -1.91
RXRBP28702 RNU6-856P-201ENST00000516959 98 ntBASIC3.12□□□□□ -1.91
RXRBP28702 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.12□□□□□ -1.91
RXRBP28702 SNORA4-201ENST00000584302 138 ntBASIC3.12□□□□□ -1.91
RXRBP28702 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RXRBP28702 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.12□□□□□ -1.91
RXRBP28702 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RXRBP28702 Y_RNA.224-201ENST00000364308 111 ntBASIC3.11□□□□□ -1.91
RXRBP28702 MIR518F-201ENST00000384973 87 ntBASIC3.11□□□□□ -1.91
RXRBP28702 MT-TI-201ENST00000387365 69 ntBASIC3.11□□□□□ -1.91
RXRBP28702 SNORA26.2-201ENST00000390922 122 ntBASIC3.11□□□□□ -1.91
RXRBP28702 AL590004.2-201ENST00000404787 371 ntBASIC3.11□□□□□ -1.91
RXRBP28702 AL117342.1-201ENST00000404861 406 ntBASIC3.11□□□□□ -1.91
RXRBP28702 BTF3P4-201ENST00000418852 495 ntBASIC3.11□□□□□ -1.91
RXRBP28702 AC060773.1-201ENST00000421698 310 ntBASIC3.11□□□□□ -1.91
RXRBP28702 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
RXRBP28702 AC073413.2-201ENST00000604332 360 ntBASIC3.11□□□□□ -1.91
RXRBP28702 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RXRBP28702 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RXRBP28702 Y_RNA.332-201ENST00000365271 113 ntBASIC3.1□□□□□ -1.91
RXRBP28702 MIR520G-201ENST00000385064 90 ntBASIC3.1□□□□□ -1.91
RXRBP28702 RNU6-440P-201ENST00000390882 105 ntBASIC3.1□□□□□ -1.91
RXRBP28702 MIR1302-5-201ENST00000408164 150 ntBASIC3.1□□□□□ -1.91
RXRBP28702 SNRPGP10-201ENST00000432323 225 ntBASIC3.1□□□□□ -1.91
RXRBP28702 SCARNA3-201ENST00000517097 143 ntBASIC3.1□□□□□ -1.91
RXRBP28702 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.1□□□□□ -1.91
RXRBP28702 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RXRBP28702 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RXRBP28702 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RXRBP28702 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RXRBP28702 AL023284.1-201ENST00000403956 276 ntBASIC3.09□□□□□ -1.91
RXRBP28702 RNU2-48P-201ENST00000410694 191 ntBASIC3.09□□□□□ -1.91
RXRBP28702 RPS26P48-201ENST00000491713 339 ntBASIC3.09□□□□□ -1.91
RXRBP28702 AC093259.1-201ENST00000509755 300 ntBASIC3.09□□□□□ -1.91
RXRBP28702 AC011406.1-201ENST00000512440 370 ntBASIC3.09□□□□□ -1.91
RXRBP28702 RNA5SP480-201ENST00000516840 109 ntBASIC3.09□□□□□ -1.91
RXRBP28702 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
RXRBP28702 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.09□□□□□ -1.91
RXRBP28702 MIR3616-201ENST00000584070 92 ntBASIC3.09□□□□□ -1.91
RXRBP28702 AL596211.1-201ENST00000569873 2277 ntBASIC3.09□□□□□ -1.92
RXRBP28702 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RXRBP28702 SNORA63.5-201ENST00000363548 123 ntBASIC3.08□□□□□ -1.92
RXRBP28702 Y_RNA.198-201ENST00000364013 98 ntBASIC3.08□□□□□ -1.92
RXRBP28702 Y_RNA.362-201ENST00000365518 110 ntBASIC3.08□□□□□ -1.92
RXRBP28702 Y_RNA.558-201ENST00000384685 113 ntBASIC3.08□□□□□ -1.92
RXRBP28702 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
RXRBP28702 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
RXRBP28702 HMGN2P34-201ENST00000437647 269 ntBASIC3.08□□□□□ -1.92
RXRBP28702 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.08□□□□□ -1.92
RXRBP28702 RNU6-240P-201ENST00000516098 97 ntBASIC3.08□□□□□ -1.92
RXRBP28702 RNU6-693P-201ENST00000516134 107 ntBASIC3.08□□□□□ -1.92
RXRBP28702 SNORA40.13-201ENST00000516379 120 ntBASIC3.08□□□□□ -1.92
RXRBP28702 MIR5197-201ENST00000583721 112 ntBASIC3.08□□□□□ -1.92
RXRBP28702 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.08□□□□□ -1.92
RXRBP28702 U6.108-201ENST00000637764 58 ntBASIC3.08□□□□□ -1.92
RXRBP28702 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RXRBP28702 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
RXRBP28702 SNORA19.1-201ENST00000410656 129 ntBASIC3.07□□□□□ -1.92
RXRBP28702 AC123900.1-201ENST00000420390 96 ntBASIC3.07□□□□□ -1.92
RXRBP28702 AC104332.2-201ENST00000429959 156 ntBASIC3.07□□□□□ -1.92
RXRBP28702 RNU6-109P-201ENST00000516364 107 ntBASIC3.07□□□□□ -1.92
RXRBP28702 RNU6-184P-201ENST00000516514 107 ntBASIC3.07□□□□□ -1.92
RXRBP28702 RNU6-1291P-201ENST00000516591 104 ntBASIC3.07□□□□□ -1.92
RXRBP28702 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.07□□□□□ -1.92
RXRBP28702 AC062037.1-201ENST00000605302 128 ntBASIC3.07□□□□□ -1.92
RXRBP28702 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RXRBP28702 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
RXRBP28702 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.06□□□□□ -1.92
RXRBP28702 RNU6-546P-201ENST00000383991 107 ntBASIC3.06□□□□□ -1.92
RXRBP28702 MIR590-201ENST00000385008 97 ntBASIC3.06□□□□□ -1.92
RXRBP28702 MIR95-201ENST00000385072 81 ntBASIC3.06□□□□□ -1.92
RXRBP28702 SNORA11.4-201ENST00000408823 129 ntBASIC3.06□□□□□ -1.92
RXRBP28702 Y_RNA.621-201ENST00000411065 96 ntBASIC3.06□□□□□ -1.92
RXRBP28702 SNRPGP13-201ENST00000442212 177 ntBASIC3.06□□□□□ -1.92
RXRBP28702 RNU6-830P-201ENST00000516353 107 ntBASIC3.06□□□□□ -1.92
RXRBP28702 MIR5007-201ENST00000583098 95 ntBASIC3.06□□□□□ -1.92
RXRBP28702 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.06□□□□□ -1.92
RXRBP28702 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
RXRBP28702 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RXRBP28702 RNU6-349P-201ENST00000362402 107 ntBASIC3.05□□□□□ -1.92
RXRBP28702 Y_RNA.49-201ENST00000362714 112 ntBASIC3.05□□□□□ -1.92
RXRBP28702 RNU1-23P-201ENST00000363361 144 ntBASIC3.05□□□□□ -1.92
RXRBP28702 RNU6-1186P-201ENST00000410429 97 ntBASIC3.05□□□□□ -1.92
RXRBP28702 RNU7-99P-201ENST00000516271 62 ntBASIC3.05□□□□□ -1.92
RXRBP28702 RNY4P20-201ENST00000516678 93 ntBASIC3.05□□□□□ -1.92
RXRBP28702 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.05□□□□□ -1.92
RXRBP28702 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
RXRBP28702 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RXRBP28702 AL589743.1-201ENST00000551932 2712 ntBASIC3.05□□□□□ -1.92
RXRBP28702 RNU6-743P-201ENST00000364151 106 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms