Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU4-47P-201ENST00000410876 114 ntBASIC3.86□□□□□ -1.79
PTPREP23469 AC015922.2-201ENST00000435593 184 ntBASIC3.86□□□□□ -1.79
PTPREP23469 RPS29P28-201ENST00000446439 141 ntBASIC3.86□□□□□ -1.79
PTPREP23469 HMGN2P7-201ENST00000456186 273 ntBASIC3.86□□□□□ -1.79
PTPREP23469 CYP2C59P-201ENST00000457790 269 ntBASIC3.86□□□□□ -1.79
PTPREP23469 RN7SL636P-201ENST00000497504 294 ntBASIC3.86□□□□□ -1.79
PTPREP23469 RNA5SP341-201ENST00000516261 117 ntBASIC3.86□□□□□ -1.79
PTPREP23469 SNORA48.11-201ENST00000517015 89 ntBASIC3.86□□□□□ -1.79
PTPREP23469 MIR4513-201ENST00000581077 86 ntBASIC3.86□□□□□ -1.79
PTPREP23469 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPREP23469 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPREP23469 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPREP23469 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.86□□□□□ -1.79
PTPREP23469 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPREP23469 RNA5SP295-201ENST00000362655 121 ntBASIC3.85□□□□□ -1.79
PTPREP23469 Y_RNA.500-201ENST00000384466 111 ntBASIC3.85□□□□□ -1.79
PTPREP23469 MIR34C-201ENST00000384831 77 ntBASIC3.85□□□□□ -1.79
PTPREP23469 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.85□□□□□ -1.79
PTPREP23469 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.85□□□□□ -1.79
PTPREP23469 AC007536.1-201ENST00000533382 349 ntBASIC3.85□□□□□ -1.79
PTPREP23469 MIR7157-201ENST00000635801 60 ntBASIC3.85□□□□□ -1.79
PTPREP23469 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
PTPREP23469 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTPREP23469 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTPREP23469 TNPO1P3-201ENST00000436471 2662 ntBASIC3.85□□□□□ -1.79
PTPREP23469 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPREP23469 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PTPREP23469 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPREP23469 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPREP23469 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPREP23469 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PTPREP23469 Y_RNA.510-201ENST00000384511 114 ntBASIC3.84□□□□□ -1.79
PTPREP23469 MIR206-201ENST00000384872 86 ntBASIC3.84□□□□□ -1.79
PTPREP23469 MIR1289-1-201ENST00000408836 144 ntBASIC3.84□□□□□ -1.79
PTPREP23469 STAG3L5P-204ENST00000443759 179 ntBASIC3.84□□□□□ -1.79
PTPREP23469 RNU1-98P-201ENST00000458992 160 ntBASIC3.84□□□□□ -1.79
PTPREP23469 RPL23AP94-201ENST00000512518 302 ntBASIC3.84□□□□□ -1.79
PTPREP23469 RNU6-958P-201ENST00000516995 106 ntBASIC3.84□□□□□ -1.79
PTPREP23469 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPREP23469 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPREP23469 AC110741.2-201ENST00000605278 268 ntBASIC3.84□□□□□ -1.79
PTPREP23469 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
PTPREP23469 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPREP23469 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPREP23469 GABRG2-229ENST00000641017 3628 ntBASIC3.84□□□□□ -1.8
PTPREP23469 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
PTPREP23469 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.8
PTPREP23469 AL442644.1-201ENST00000454390 3105 ntBASIC3.84□□□□□ -1.8
PTPREP23469 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPREP23469 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTPREP23469 MIR592-201ENST00000384959 97 ntBASIC3.83□□□□□ -1.8
PTPREP23469 MIR548G-201ENST00000408442 89 ntBASIC3.83□□□□□ -1.8
PTPREP23469 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPREP23469 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPREP23469 AC006539.3-201ENST00000454258 129 ntBASIC3.83□□□□□ -1.8
PTPREP23469 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.83□□□□□ -1.8
PTPREP23469 RNU6-826P-201ENST00000516827 104 ntBASIC3.83□□□□□ -1.8
PTPREP23469 Y_RNA.788-201ENST00000622394 112 ntBASIC3.83□□□□□ -1.8
PTPREP23469 MIR6717-201ENST00000622747 73 ntBASIC3.83□□□□□ -1.8
PTPREP23469 AC006386.2-201ENST00000624491 75 ntBASIC3.83□□□□□ -1.8
PTPREP23469 AC012005.1-201ENST00000624575 75 ntBASIC3.83□□□□□ -1.8
PTPREP23469 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPREP23469 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPREP23469 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPREP23469 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPREP23469 MIRLET7C-201ENST00000362160 84 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU6-862P-201ENST00000362804 105 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU6-129P-201ENST00000391022 107 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNA5SP261-201ENST00000410536 106 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU6-1190P-201ENST00000410811 104 ntBASIC3.82□□□□□ -1.8
PTPREP23469 COTL1P1-201ENST00000422309 375 ntBASIC3.82□□□□□ -1.8
PTPREP23469 UBE2DNL-203ENST00000474922 222 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU7-53P-201ENST00000516705 60 ntBASIC3.82□□□□□ -1.8
PTPREP23469 RNU6-667P-201ENST00000517186 102 ntBASIC3.82□□□□□ -1.8
PTPREP23469 DNAJC19P9-201ENST00000555084 351 ntBASIC3.82□□□□□ -1.8
PTPREP23469 AL513043.2-201ENST00000573941 143 ntBASIC3.82□□□□□ -1.8
PTPREP23469 AL356280.1-201ENST00000603614 379 ntBASIC3.82□□□□□ -1.8
PTPREP23469 AC110079.1-202ENST00000635213 138 ntBASIC3.82□□□□□ -1.8
PTPREP23469 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
PTPREP23469 MIR422A-201ENST00000362286 90 ntBASIC3.81□□□□□ -1.8
PTPREP23469 SNORA70.7-201ENST00000384159 133 ntBASIC3.81□□□□□ -1.8
PTPREP23469 RNU7-67P-201ENST00000459003 62 ntBASIC3.81□□□□□ -1.8
PTPREP23469 MIR4791-201ENST00000607666 84 ntBASIC3.81□□□□□ -1.8
PTPREP23469 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPREP23469 AC027279.3-201ENST00000625055 122 ntBASIC3.81□□□□□ -1.8
PTPREP23469 MIR7515-201ENST00000637837 67 ntBASIC3.81□□□□□ -1.8
PTPREP23469 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPREP23469 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPREP23469 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 Y_RNA.57-201ENST00000362806 113 ntBASIC3.8□□□□□ -1.8
PTPREP23469 RNU6-478P-201ENST00000363904 110 ntBASIC3.8□□□□□ -1.8
PTPREP23469 SNORA80A-201ENST00000363922 136 ntBASIC3.8□□□□□ -1.8
PTPREP23469 SNORD6-201ENST00000365444 73 ntBASIC3.8□□□□□ -1.8
PTPREP23469 RNA5SP109-201ENST00000391010 116 ntBASIC3.8□□□□□ -1.8
PTPREP23469 RN7SL442P-201ENST00000473804 320 ntBASIC3.8□□□□□ -1.8
PTPREP23469 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPREP23469 AC104027.1-201ENST00000521887 300 ntBASIC3.8□□□□□ -1.8
PTPREP23469 AC020891.4-201ENST00000605745 93 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms