Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MIR1273D-201ENST00000577266 86 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 SNORA28-201ENST00000606769 126 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
PTPN1P18031 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN1P18031 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTPN1P18031 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN1P18031 U8.1-201ENST00000362843 134 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 Y_RNA.120-201ENST00000363304 110 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 SNORA63D-201ENST00000364359 132 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 RNU6-442P-201ENST00000383968 104 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 SNORA22C-201ENST00000384614 134 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 MIR144-201ENST00000384886 86 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PTPN1P18031 SNORA48.1-201ENST00000390879 135 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN1P18031 RNU6-693P-201ENST00000516134 107 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 SNORA31.10-201ENST00000516482 106 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN1P18031 MIR3129-201ENST00000581095 76 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN1P18031 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN1P18031 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
PTPN1P18031 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTPN1P18031 Y_RNA.127-201ENST00000363386 109 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORD116-14-201ENST00000383894 92 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORD116-17-201ENST00000383929 92 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORA1-201ENST00000384107 130 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORD116-15-201ENST00000384445 92 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORD116-19-201ENST00000384729 92 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 MIR524-201ENST00000385242 87 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 RNA5SP200-201ENST00000516360 103 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 SNORD45.4-201ENST00000516629 73 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 RNU6-1234P-201ENST00000516877 103 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 MIR6715A-201ENST00000615929 79 ntBASIC2.34□□□□□ -2.03
PTPN1P18031 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
PTPN1P18031 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.04
PTPN1P18031 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.04
PTPN1P18031 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.33□□□□□ -2.04
PTPN1P18031 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN1P18031 RNU6-80P-201ENST00000384195 107 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 RNU6-950P-201ENST00000384651 107 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 MIR548A2-201ENST00000384956 97 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN1P18031 RNU6-1333P-201ENST00000516162 93 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 Y_RNA.686-201ENST00000516548 134 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 Y_RNA.757-201ENST00000578934 114 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 AC006441.5-201ENST00000612680 209 ntBASIC2.33□□□□□ -2.04
PTPN1P18031 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTPN1P18031 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
PTPN1P18031 Y_RNA.261-201ENST00000364631 102 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 Y_RNA.336-201ENST00000365307 109 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 SNORD18B-201ENST00000365659 72 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 RNU6-1292P-201ENST00000383856 107 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 MIR548O-201ENST00000408583 114 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 RN7SKP200-201ENST00000410564 320 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 RN7SKP192-201ENST00000411291 327 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 AL158823.1-201ENST00000418441 478 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 HSPE1P9-201ENST00000440046 311 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 HMGN2P32-201ENST00000444648 269 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 RNU4-57P-201ENST00000515980 135 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 Y_RNA.692-201ENST00000516627 105 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
PTPN1P18031 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
PTPN1P18031 AC131280.1-202ENST00000624067 4211 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 Y_RNA.52-201ENST00000362760 96 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 RNU6-268P-201ENST00000364174 107 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 MIR518F-201ENST00000384973 87 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN1P18031 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 SUB1P4-201ENST00000566062 339 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 AC104984.5-201ENST00000586878 94 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPN1P18031 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPN1P18031 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
PTPN1P18031 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
PTPN1P18031 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
PTPN1P18031 RNU6-1290P-201ENST00000362957 109 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 RNA5SP205-201ENST00000364653 136 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 SNORA4.2-201ENST00000365313 147 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 MIR891A-201ENST00000401237 79 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 AL034345.1-201ENST00000407768 123 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 RNU2-7P-201ENST00000410794 178 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 SNRPGP14-201ENST00000435400 219 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 CYCTP-201ENST00000504253 315 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 AC114811.1-201ENST00000507207 168 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.3□□□□□ -2.04
PTPN1P18031 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 RNU2-60P-201ENST00000517290 128 ntBASIC2.3□□□□□ -2.04
PTPN1P18031 U1.36-201ENST00000620684 176 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms