Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MIR424-201ENST00000362227 98 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-1123P-201ENST00000362347 106 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 Y_RNA.75-201ENST00000362927 97 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 Y_RNA.182-201ENST00000363880 111 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-275P-201ENST00000364910 107 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-728P-201ENST00000365375 104 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 PIGPP3-201ENST00000425307 415 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 HMGN2P32-201ENST00000444648 269 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU7-149P-201ENST00000516739 59 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DOBP13765 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DOBP13765 AL096840.1-201ENST00000603287 93 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 AC108706.1-201ENST00000611053 297 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.51□□□□□ -2.17
HLA-DOBP13765 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DOBP13765 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
HLA-DOBP13765 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 SNORD14E-201ENST00000364009 85 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 SNORD50B-201ENST00000364995 70 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 Y_RNA.336-201ENST00000365307 109 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 RNU6-163P-201ENST00000384396 106 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 MIR660-201ENST00000385235 97 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 CYCSP49-201ENST00000420810 319 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 snoU13.26-201ENST00000459452 105 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 SNORD45.4-201ENST00000516629 73 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 AC022559.1-201ENST00000520905 205 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 AC109810.1-201ENST00000534066 224 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 MRPS18CP4-201ENST00000535821 231 ntBASIC1.5□□□□□ -2.17
HLA-DOBP13765 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DOBP13765 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
HLA-DOBP13765 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-682P-201ENST00000363843 106 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-312P-201ENST00000364629 107 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-442P-201ENST00000383968 104 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 Y_RNA.412-201ENST00000384001 104 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-439P-201ENST00000384188 106 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 SNORA26-201ENST00000391286 122 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU4-43P-201ENST00000410628 137 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 AL161935.2-201ENST00000414627 60 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 AC114811.1-201ENST00000507207 168 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU7-12P-201ENST00000516030 62 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-1219P-201ENST00000516143 112 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 RNU6-1299P-201ENST00000516316 100 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DOBP13765 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 FTX_2.1-201ENST00000618816 94 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 U6.106-201ENST00000636360 105 ntBASIC1.49□□□□□ -2.17
HLA-DOBP13765 Y_RNA.23-201ENST00000362496 106 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 Y_RNA.240-201ENST00000364469 95 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 Y_RNA.432-201ENST00000384087 111 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 MIR15B-201ENST00000385045 98 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 MIR504-201ENST00000385065 83 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HLA-DOBP13765 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HLA-DOBP13765 SNORD72-201ENST00000390994 80 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 MIR891A-201ENST00000401237 79 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 SNORA79-201ENST00000408376 140 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 AC004965.1-201ENST00000413033 213 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 AL121914.1-201ENST00000450188 156 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 RPL23AP42-201ENST00000471152 471 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 Y_RNA.662-201ENST00000516028 97 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 RNA5SP153-201ENST00000516498 76 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 RNU6-861P-201ENST00000516745 106 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 RNU6-1116P-201ENST00000517269 99 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 Pinc.1-201ENST00000616452 154 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
HLA-DOBP13765 SNORD45.3-201ENST00000363836 72 ntBASIC1.47□□□□□ -2.17
HLA-DOBP13765 RNU6-484P-201ENST00000384016 107 ntBASIC1.47□□□□□ -2.17
HLA-DOBP13765 Y_RNA.555-201ENST00000384673 110 ntBASIC1.47□□□□□ -2.17
HLA-DOBP13765 Y_RNA.622-201ENST00000411091 108 ntBASIC1.47□□□□□ -2.17
HLA-DOBP13765 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
HLA-DOBP13765 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DOBP13765 Y_RNA.270-201ENST00000364693 104 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 SNORA26.9-201ENST00000391322 122 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DOBP13765 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DOBP13765 AC005840.1-201ENST00000498412 377 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 RNU6-197P-201ENST00000516680 100 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 SNORA77B-201ENST00000578179 125 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 MIR4431-201ENST00000579990 94 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 AC097639.2-201ENST00000603159 172 ntBASIC1.46□□□□□ -2.18
HLA-DOBP13765 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DOBP13765 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
HLA-DOBP13765 RNA5SP363-201ENST00000365072 115 ntBASIC1.45□□□□□ -2.18
HLA-DOBP13765 MIR452-201ENST00000385020 85 ntBASIC1.45□□□□□ -2.18
HLA-DOBP13765 MIR30A-201ENST00000385092 71 ntBASIC1.45□□□□□ -2.18
HLA-DOBP13765 RNU2-70P-201ENST00000410718 179 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms