Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.5□□□□□ -1.85
CSB-PGBD3P0DP91 AC141557.1-201ENST00000540982 400 ntBASIC3.5□□□□□ -1.85
CSB-PGBD3P0DP91 MIR4524B-201ENST00000581569 115 ntBASIC3.5□□□□□ -1.85
CSB-PGBD3P0DP91 MALAT1.1-201ENST00000618249 95 ntBASIC3.5□□□□□ -1.85
CSB-PGBD3P0DP91 Y_RNA.818-201ENST00000618813 71 ntBASIC3.5□□□□□ -1.85
CSB-PGBD3P0DP91 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-23P-201ENST00000363283 107 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 RNU1-148P-201ENST00000384472 162 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 Z98742.3-201ENST00000418637 326 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 RNA5SP320-201ENST00000516263 124 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 RNU1-142P-201ENST00000516682 145 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 MIR4635-201ENST00000583759 79 ntBASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CSB-PGBD3P0DP91 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 Y_RNA.213-201ENST00000364178 111 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-690P-201ENST00000365242 106 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNA5SP323-201ENST00000391094 133 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNU11-5P-201ENST00000391216 129 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNU4-53P-201ENST00000410828 140 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RPS3AP1-201ENST00000413190 320 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-904P-201ENST00000516206 101 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNA5SP282-201ENST00000516355 108 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-158P-201ENST00000517104 100 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 MIR3169-201ENST00000578032 83 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 SNORD115-40-201ENST00000606510 82 ntBASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CSB-PGBD3P0DP91 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-349P-201ENST00000362402 107 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 RNU6-1104P-201ENST00000384723 104 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 RPPH1-2P-201ENST00000516688 293 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 MIR4769-201ENST00000584126 77 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 AC022217.4-201ENST00000604389 163 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CSB-PGBD3P0DP91 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CSB-PGBD3P0DP91 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CSB-PGBD3P0DP91 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR126-201ENST00000362291 85 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6-862P-201ENST00000362804 105 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.78-201ENST00000362970 110 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 SNORA33-201ENST00000363664 130 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR515-2-201ENST00000384883 83 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR515-1-201ENST00000384884 83 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR450A2-201ENST00000385022 100 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR29C-201ENST00000385231 88 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 snoU13.15-201ENST00000459407 104 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 SUMO2P16-201ENST00000519475 264 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 AC084364.2-201ENST00000546924 395 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 MIR4658-201ENST00000584344 65 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 U4.3-201ENST00000621047 82 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 U6.108-201ENST00000637764 58 ntBASIC3.46□□□□□ -1.86
CSB-PGBD3P0DP91 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 MIR494-201ENST00000349529 81 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.298-201ENST00000364960 107 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.342-201ENST00000365352 113 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 SNORA2.2-201ENST00000365473 135 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6-1152P-201ENST00000384576 107 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 RNA5SP492-201ENST00000411330 114 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 CST2P1-201ENST00000425770 87 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 AC004486.1-201ENST00000546846 233 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 AC022523.2-201ENST00000561045 150 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 MIR3605-201ENST00000583214 100 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 AC021443.1-201ENST00000604478 211 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 ZNF271P-202ENST00000465539 1970 ntBASIC3.45□□□□□ -1.86
CSB-PGBD3P0DP91 RNY1P10-201ENST00000363268 113 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.267-201ENST00000364679 109 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 RNU6-820P-201ENST00000384273 107 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 SNORA8-201ENST00000384574 139 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 MIR27B-201ENST00000385129 97 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 MIR548O-201ENST00000408583 114 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 RN7SKP192-201ENST00000411291 327 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 RPS29P6-201ENST00000438196 145 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 RNA5SP385-201ENST00000515947 110 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 Y_RNA.685-201ENST00000516532 108 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 AC245166.1-201ENST00000521012 253 ntBASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CSB-PGBD3P0DP91 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 RNU1-58P-201ENST00000362413 163 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 MIR522-201ENST00000385071 87 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 AC107297.1-201ENST00000459991 176 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 RN7SL75P-201ENST00000461926 281 ntBASIC3.43□□□□□ -1.86
CSB-PGBD3P0DP91 RNU7-123P-201ENST00000515911 60 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms