Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 SNORD77.4-201ENST00000516158 81 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 RPL23AP91-201ENST00000569211 455 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 AC105245.1-201ENST00000581934 244 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 MIR4765-201ENST00000585007 77 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 Pinc.1-201ENST00000616452 154 ntBASIC2.22□□□□□ -2.05
COL3A1P02461 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL3A1P02461 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.22□□□□□ -2.05
COL3A1P02461 Y_RNA.203-201ENST00000364106 102 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 RNU6-438P-201ENST00000365561 103 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 MIR548A1-201ENST00000385041 97 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 MTATP6P21-201ENST00000440681 189 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 AC016717.1-201ENST00000448918 286 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 RPS27P22-201ENST00000478056 241 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 TRMT112P2-201ENST00000512910 132 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 RNA5SP490-201ENST00000517141 136 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 RNU2-60P-201ENST00000517290 128 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 AC025647.1-201ENST00000517879 253 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 MIR4662B-201ENST00000579498 81 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 AL929325.1-201ENST00000603096 117 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 AC097639.2-201ENST00000603159 172 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 AC025166.1-201ENST00000612411 163 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
COL3A1P02461 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.21□□□□□ -2.06
COL3A1P02461 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
COL3A1P02461 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
COL3A1P02461 RNU6-32P-201ENST00000383948 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-13P-201ENST00000384248 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-12P-201ENST00000384604 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-41P-201ENST00000384741 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNA5SP354-201ENST00000391247 136 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 MIR1276-201ENST00000408707 83 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 AL031737.1-201ENST00000450125 223 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 Y_RNA.649-201ENST00000459077 103 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNA5SP112-201ENST00000515937 99 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-365P-201ENST00000517113 106 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 AC091178.2-201ENST00000584401 117 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-117P-201ENST00000365415 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-880P-201ENST00000384526 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-1235P-201ENST00000384559 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 MIR624-201ENST00000385217 97 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 MIR767-201ENST00000390228 109 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNA5SP127-201ENST00000411051 133 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.2□□□□□ -2.06
COL3A1P02461 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-498P-201ENST00000459468 107 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RPS29P24-201ENST00000486345 171 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 RNU6-412P-201ENST00000516434 106 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 MIR5582-201ENST00000579697 68 ntBASIC2.2□□□□□ -2.06
COL3A1P02461 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.2□□□□□ -2.06
COL3A1P02461 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.19□□□□□ -2.06
COL3A1P02461 Y_RNA.91-201ENST00000363042 107 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 RNU6-418P-201ENST00000384035 107 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 Y_RNA.495-201ENST00000384435 112 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 RNA5SP252-201ENST00000391131 119 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 OR9P1P-201ENST00000496431 281 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 RNU6-504P-201ENST00000516568 104 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 MIR4474-201ENST00000579189 78 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 AL022345.2-201ENST00000606307 135 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.19□□□□□ -2.06
COL3A1P02461 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL3A1P02461 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.18□□□□□ -2.06
COL3A1P02461 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU6-1209P-201ENST00000363655 107 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU6-1138P-201ENST00000365359 106 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 Y_RNA.369-201ENST00000365568 117 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 MIRLET7F2-201ENST00000385277 83 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 MTCO1P44-201ENST00000441935 243 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 AC245102.2-201ENST00000448956 180 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 AL031183.1-201ENST00000457667 207 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 SNORD11-201ENST00000459124 84 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 ATP5EP1-201ENST00000510257 156 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU6-781P-201ENST00000516377 101 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU2-34P-201ENST00000516534 121 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU7-149P-201ENST00000516739 59 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU6-56P-201ENST00000516986 93 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 RNU1-104P-201ENST00000517280 175 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 AC011604.1-201ENST00000545978 196 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 JPX_2.1-201ENST00000614161 69 ntBASIC2.18□□□□□ -2.06
COL3A1P02461 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
COL3A1P02461 MTND5P18-201ENST00000445624 1801 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
COL3A1P02461 RNU6-486P-201ENST00000363116 107 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
COL3A1P02461 MIR891A-201ENST00000401237 79 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 RNY4P30-201ENST00000410216 95 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.17□□□□□ -2.06
COL3A1P02461 AF228730.3-201ENST00000436691 102 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 Y_RNA.677-201ENST00000516401 85 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 RNU6-537P-201ENST00000517277 103 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 MIR3618-201ENST00000580330 88 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 AL365205.2-201ENST00000594586 68 ntBASIC2.17□□□□□ -2.06
COL3A1P02461 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms