Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-461P-201ENST00000364195 107 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNU4-41P-201ENST00000364426 143 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNU6-728P-201ENST00000365375 104 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNU6-429P-201ENST00000384582 108 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 MIR767-201ENST00000390228 109 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNA5SP354-201ENST00000391247 136 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 AL355497.1-201ENST00000406262 551 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RPS29P1-201ENST00000465274 159 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNA5SP20-201ENST00000515976 84 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 AC079598.5-201ENST00000547460 117 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 MIR3117-201ENST00000584034 78 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 AL929325.1-201ENST00000603096 117 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 RNU6-91P-201ENST00000607774 107 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 MIR6840-201ENST00000611937 71 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
COL2A1P02458 MIR548AY-201ENST00000617669 107 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 MIR6788-201ENST00000618842 66 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 UCA1.1-201ENST00000620952 75 ntBASIC1.67□□□□□ -2.14
COL2A1P02458 SNORD45.3-201ENST00000363836 72 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 SNORD32B-201ENST00000364460 84 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 SNORD116-14-201ENST00000383894 92 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 SNORD116-17-201ENST00000383929 92 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 SNORD116-15-201ENST00000384445 92 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 SNORD116-19-201ENST00000384729 92 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 MIR520E-201ENST00000384867 87 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 MIR1283-1-201ENST00000408494 87 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 RNU6-1328P-201ENST00000410938 106 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.66□□□□□ -2.14
COL2A1P02458 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.66□□□□□ -2.14
COL2A1P02458 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL2A1P02458 AC108081.1-201ENST00000604358 221 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 AL138880.2-201ENST00000616214 239 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 MIR1248-201ENST00000629190 106 ntBASIC1.66□□□□□ -2.14
COL2A1P02458 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.66□□□□□ -2.14
COL2A1P02458 MTND5P32-201ENST00000560711 1802 ntBASIC1.65□□□□□ -2.14
COL2A1P02458 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.65□□□□□ -2.14
COL2A1P02458 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL2A1P02458 RNU6-915P-201ENST00000364943 103 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 MIR526A2-201ENST00000390198 65 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 RPS27P22-201ENST00000478056 241 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 RNU6-919P-201ENST00000516731 104 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 AP001328.1-201ENST00000528550 176 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 MTND5P34-201ENST00000568888 325 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 MIR4753-201ENST00000585119 83 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 AC005972.2-201ENST00000604690 348 ntBASIC1.65□□□□□ -2.15
COL2A1P02458 SNORA27.1-201ENST00000362604 124 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
COL2A1P02458 SNORA22-201ENST00000383907 134 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 MIR586-201ENST00000385035 97 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 Y_RNA.630-201ENST00000411370 108 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 HMGN2P18-201ENST00000450680 270 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 SNORA70.12-201ENST00000516084 153 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 MIR7515-201ENST00000637837 67 ntBASIC1.64□□□□□ -2.15
COL2A1P02458 RNU6-153P-201ENST00000364422 104 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-234P-201ENST00000365229 104 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-438P-201ENST00000365561 103 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 MIR539-201ENST00000365690 78 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-144P-201ENST00000383951 107 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-1080P-201ENST00000383982 107 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU2-40P-201ENST00000410833 196 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.63□□□□□ -2.15
COL2A1P02458 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
COL2A1P02458 RPS27P1-201ENST00000450552 247 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RPS29P29-201ENST00000456396 171 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-659P-201ENST00000516454 104 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RPL23AP91-201ENST00000569211 455 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AP003357.1-201ENST00000604497 148 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 uc_338.14-201ENST00000613162 166 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 TUG1_4.1-201ENST00000619464 181 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.63□□□□□ -2.15
COL2A1P02458 snoZ196.1-201ENST00000625269 89 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AC110079.1-202ENST00000635213 138 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL2A1P02458 Y_RNA.91-201ENST00000363042 107 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 Y_RNA.251-201ENST00000364551 99 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-309P-201ENST00000364573 106 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 Y_RNA.393-201ENST00000383936 102 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-975P-201ENST00000384296 105 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 MIR873-201ENST00000401120 77 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 Y_RNA.621-201ENST00000411065 96 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 MLLT10P1-201ENST00000418346 262 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.63□□□□□ -2.15
COL2A1P02458 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.63□□□□□ -2.15
COL2A1P02458 AC074290.1-201ENST00000448883 135 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-437P-201ENST00000459408 95 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AC004223.1-201ENST00000479840 271 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AC010598.1-201ENST00000510378 103 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 RNU6-1061P-201ENST00000516530 99 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 MIR378D2-201ENST00000580636 98 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 AL391903.3-201ENST00000612158 163 ntBASIC1.63□□□□□ -2.15
COL2A1P02458 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms