Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.92□□□□□ -2.72
LTN1O94822 RNU6-268P-201ENST00000364174 107 ntBASIC-1.92□□□□□ -2.72
LTN1O94822 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.92□□□□□ -2.72
LTN1O94822 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.92□□□□□ -2.72
LTN1O94822 AC069113.1-201ENST00000517763 267 ntBASIC-1.92□□□□□ -2.72
LTN1O94822 RNU6-883P-201ENST00000384597 107 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.93□□□□□ -2.72
LTN1O94822 RNU6-612P-201ENST00000516909 102 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 snoU83B.1-201ENST00000517136 88 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AC011603.4-201ENST00000611325 277 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AC004223.4-201ENST00000612426 332 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 SNORD14E-201ENST00000364009 85 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 RNU6-393P-201ENST00000384475 107 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AC105417.1-201ENST00000514691 285 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 RNU6-732P-201ENST00000516033 103 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.93□□□□□ -2.72
LTN1O94822 MIR5591-201ENST00000578248 65 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 AC022418.1-201ENST00000624118 445 ntBASIC-1.93□□□□□ -2.72
LTN1O94822 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 SNORD24-201ENST00000383884 75 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 RNU6-298P-201ENST00000390888 96 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.94□□□□□ -2.72
LTN1O94822 U6.115-201ENST00000636045 103 ntBASIC-1.94□□□□□ -2.72
LTN1O94822 RNU6-179P-201ENST00000363350 107 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 AC016907.1-201ENST00000419483 435 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 MIR3941-201ENST00000582572 103 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 AL662814.1-201ENST00000617364 121 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 AC009248.2-201ENST00000619826 254 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 RNU4-1-201ENST00000363925 141 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 AC096949.1-201ENST00000412047 152 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.95□□□□□ -2.72
LTN1O94822 RNA5SP484-201ENST00000458857 111 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 SNORD18.2-201ENST00000459604 70 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.95□□□□□ -2.72
LTN1O94822 AC026421.1-201ENST00000519101 163 ntBASIC-1.95□□□□□ -2.72
LTN1O94822 SNORA63.5-201ENST00000363548 123 ntBASIC-1.96□□□□□ -2.72
LTN1O94822 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.96□□□□□ -2.72
LTN1O94822 AL158209.2-201ENST00000619266 216 ntBASIC-1.96□□□□□ -2.72
LTN1O94822 RNU6-792P-201ENST00000363490 107 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 RNU6-621P-201ENST00000364752 109 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 MIR539-201ENST00000365690 78 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 SNORA72.6-201ENST00000384520 129 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 SNORD73A-201ENST00000386062 65 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 AC002044.1-201ENST00000606707 158 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 TUSC7.1-201ENST00000610969 165 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 MIR8084-201ENST00000614105 89 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 AC069503.3-201ENST00000618674 145 ntBASIC-1.97□□□□□ -2.72
LTN1O94822 RNU4-58P-201ENST00000363192 141 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 MTCYBP36-201ENST00000404146 440 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 AC024405.2-202ENST00000532731 184 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 RNU6-550P-201ENST00000391057 101 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 RNU7-104P-201ENST00000459398 79 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 RNU7-55P-201ENST00000459426 62 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 uc_338.11-201ENST00000619132 160 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 AC097460.3-201ENST00000623099 442 ntBASIC-1.98□□□□□ -2.73
LTN1O94822 RNU6-715P-201ENST00000365204 103 ntBASIC-1.99□□□□□ -2.73
LTN1O94822 SNORD115-7-201ENST00000365306 82 ntBASIC-1.99□□□□□ -2.73
LTN1O94822 SNORA25.16-201ENST00000516741 121 ntBASIC-1.99□□□□□ -2.73
LTN1O94822 MIR4473-201ENST00000583731 91 ntBASIC-1.99□□□□□ -2.73
LTN1O94822 AC011373.1-201ENST00000607270 237 ntBASIC-1.99□□□□□ -2.73
LTN1O94822 Y_RNA.377-201ENST00000365644 108 ntBASIC-2□□□□□ -2.73
LTN1O94822 RNU6-949P-201ENST00000384040 107 ntBASIC-2□□□□□ -2.73
LTN1O94822 MIR147A-201ENST00000385079 72 ntBASIC-2□□□□□ -2.73
LTN1O94822 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-2□□□□□ -2.73
LTN1O94822 RNA5SP237-201ENST00000410414 113 ntBASIC-2□□□□□ -2.73
LTN1O94822 FCF1P4-201ENST00000448326 183 ntBASIC-2□□□□□ -2.73
LTN1O94822 MTCO2P29-201ENST00000465212 189 ntBASIC-2□□□□□ -2.73
LTN1O94822 SERF1AP1-201ENST00000514575 187 ntBASIC-2□□□□□ -2.73
LTN1O94822 UBL5P4-201ENST00000562584 236 ntBASIC-2□□□□□ -2.73
LTN1O94822 AC005828.6-201ENST00000606610 232 ntBASIC-2□□□□□ -2.73
LTN1O94822 AP001282.2-201ENST00000616149 309 ntBASIC-2□□□□□ -2.73
LTN1O94822 Y_RNA.151-201ENST00000363566 112 ntBASIC-2□□□□□ -2.73
LTN1O94822 SNORD70.1-201ENST00000391007 85 ntBASIC-2□□□□□ -2.73
LTN1O94822 RNU2-29P-201ENST00000410423 189 ntBASIC-2□□□□□ -2.73
LTN1O94822 RNU6-1337P-201ENST00000516525 95 ntBASIC-2□□□□□ -2.73
LTN1O94822 AP003733.2-201ENST00000529409 171 ntBASIC-2□□□□□ -2.73
LTN1O94822 RNU6-85P-201ENST00000605989 107 ntBASIC-2□□□□□ -2.73
LTN1O94822 AC109347.2-201ENST00000610220 349 ntBASIC-2□□□□□ -2.73
LTN1O94822 AC019226.2-201ENST00000625973 424 ntBASIC-2□□□□□ -2.73
LTN1O94822 U6.114-201ENST00000636407 96 ntBASIC-2□□□□□ -2.73
LTN1O94822 Y_RNA.37-201ENST00000362606 108 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 RNU6-880P-201ENST00000384526 107 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 SNORA40.5-201ENST00000391061 128 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 RPL30P16-201ENST00000419341 429 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 MTND2P18-201ENST00000419962 1030 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 ELOCP4-201ENST00000420090 333 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 UBE2D3P4-201ENST00000441973 436 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 RNU7-74P-201ENST00000459104 62 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 RPL30P10-201ENST00000488148 337 ntBASIC-2.01□□□□□ -2.73
LTN1O94822 RNU1-141P-201ENST00000364623 158 ntBASIC-2.02□□□□□ -2.73
LTN1O94822 RNU4-28P-201ENST00000364739 141 ntBASIC-2.02□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms