Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RNU7-121P-201ENST00000516604 62 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
USP1O94782 SNORA31.17-201ENST00000516953 127 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNA5SP437-201ENST00000517249 129 ntBASIC2.02□□□□□ -2.09
USP1O94782 JPX_2.1-201ENST00000614161 69 ntBASIC2.02□□□□□ -2.09
USP1O94782 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP1O94782 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USP1O94782 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
USP1O94782 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
USP1O94782 MIR569-201ENST00000385228 96 ntBASIC2.01□□□□□ -2.09
USP1O94782 SNORD77.4-201ENST00000516158 81 ntBASIC2.01□□□□□ -2.09
USP1O94782 RNU6-341P-201ENST00000516973 96 ntBASIC2.01□□□□□ -2.09
USP1O94782 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.01□□□□□ -2.09
USP1O94782 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.01□□□□□ -2.09
USP1O94782 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
USP1O94782 uc_338.4-201ENST00000616635 176 ntBASIC2.01□□□□□ -2.09
USP1O94782 AL591926.4-201ENST00000616895 298 ntBASIC2.01□□□□□ -2.09
USP1O94782 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
USP1O94782 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USP1O94782 RNU6-704P-201ENST00000364162 103 ntBASIC2□□□□□ -2.09
USP1O94782 Y_RNA.432-201ENST00000384087 111 ntBASIC2□□□□□ -2.09
USP1O94782 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
USP1O94782 Y_RNA.488-201ENST00000384403 102 ntBASIC2□□□□□ -2.09
USP1O94782 SNORA20-201ENST00000384662 132 ntBASIC2□□□□□ -2.09
USP1O94782 RNU4-43P-201ENST00000410628 137 ntBASIC2□□□□□ -2.09
USP1O94782 TMSB4XP3-201ENST00000445144 114 ntBASIC2□□□□□ -2.09
USP1O94782 RNU7-149P-201ENST00000516739 59 ntBASIC2□□□□□ -2.09
USP1O94782 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
USP1O94782 DNAJC19P2-201ENST00000593340 302 ntBASIC2□□□□□ -2.09
USP1O94782 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2□□□□□ -2.09
USP1O94782 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
USP1O94782 RNY3P5-201ENST00000384127 102 ntBASIC1.99□□□□□ -2.09
USP1O94782 RNU6-950P-201ENST00000384651 107 ntBASIC1.99□□□□□ -2.09
USP1O94782 MIR613-201ENST00000385248 95 ntBASIC1.99□□□□□ -2.09
USP1O94782 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
USP1O94782 SNORD72-201ENST00000390994 80 ntBASIC1.99□□□□□ -2.09
USP1O94782 AC245047.3-201ENST00000429428 127 ntBASIC1.99□□□□□ -2.09
USP1O94782 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
USP1O94782 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.99□□□□□ -2.09
USP1O94782 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
USP1O94782 RNU6-789P-201ENST00000517105 102 ntBASIC1.99□□□□□ -2.09
USP1O94782 AL358944.1-201ENST00000528537 144 ntBASIC1.99□□□□□ -2.09
USP1O94782 AC120024.3-201ENST00000603167 156 ntBASIC1.99□□□□□ -2.09
USP1O94782 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
USP1O94782 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
USP1O94782 Y_RNA.337-201ENST00000365312 102 ntBASIC1.98□□□□□ -2.09
USP1O94782 Y_RNA.521-201ENST00000384560 114 ntBASIC1.98□□□□□ -2.09
USP1O94782 SNORD37.2-201ENST00000391075 66 ntBASIC1.98□□□□□ -2.09
USP1O94782 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
USP1O94782 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
USP1O94782 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.98□□□□□ -2.09
USP1O94782 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USP1O94782 HSPE1P9-201ENST00000440046 311 ntBASIC1.98□□□□□ -2.09
USP1O94782 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
USP1O94782 RNU6-197P-201ENST00000516680 100 ntBASIC1.98□□□□□ -2.09
USP1O94782 RNU2-56P-201ENST00000516826 190 ntBASIC1.98□□□□□ -2.09
USP1O94782 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
USP1O94782 MIR2681-201ENST00000581814 105 ntBASIC1.98□□□□□ -2.09
USP1O94782 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USP1O94782 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
USP1O94782 AC132825.6-201ENST00000638861 357 ntBASIC1.98□□□□□ -2.09
USP1O94782 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
USP1O94782 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
USP1O94782 MIR126-201ENST00000362291 85 ntBASIC1.97□□□□□ -2.09
USP1O94782 Y_RNA.568-201ENST00000384742 113 ntBASIC1.97□□□□□ -2.09
USP1O94782 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
USP1O94782 RNU6-1299P-201ENST00000516316 100 ntBASIC1.97□□□□□ -2.09
USP1O94782 AP002004.2-201ENST00000531656 154 ntBASIC1.97□□□□□ -2.09
USP1O94782 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
USP1O94782 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
USP1O94782 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.97□□□□□ -2.09
USP1O94782 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.09
USP1O94782 RNU6-661P-201ENST00000362409 107 ntBASIC1.96□□□□□ -2.1
USP1O94782 RNU6-199P-201ENST00000362954 107 ntBASIC1.96□□□□□ -2.1
USP1O94782 SNORD68-201ENST00000363214 84 ntBASIC1.96□□□□□ -2.1
USP1O94782 RNU6-1082P-201ENST00000364574 107 ntBASIC1.96□□□□□ -2.1
USP1O94782 Y_RNA.634-201ENST00000364811 113 ntBASIC1.96□□□□□ -2.1
USP1O94782 Y_RNA.393-201ENST00000383936 102 ntBASIC1.96□□□□□ -2.1
USP1O94782 Y_RNA.497-201ENST00000384447 98 ntBASIC1.96□□□□□ -2.1
USP1O94782 RNU6-460P-201ENST00000391158 108 ntBASIC1.96□□□□□ -2.1
USP1O94782 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
USP1O94782 RNU2-70P-201ENST00000410718 179 ntBASIC1.96□□□□□ -2.1
USP1O94782 snoU13.23-201ENST00000458863 104 ntBASIC1.96□□□□□ -2.1
USP1O94782 snoU13.27-201ENST00000459278 104 ntBASIC1.96□□□□□ -2.1
USP1O94782 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
USP1O94782 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
USP1O94782 AC112693.2-201ENST00000556538 232 ntBASIC1.96□□□□□ -2.1
USP1O94782 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.96□□□□□ -2.1
USP1O94782 Pinc.1-201ENST00000616452 154 ntBASIC1.96□□□□□ -2.1
USP1O94782 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.96□□□□□ -2.1
USP1O94782 RNU6-978P-201ENST00000364371 103 ntBASIC1.95□□□□□ -2.1
USP1O94782 SNORA4.2-201ENST00000365313 147 ntBASIC1.95□□□□□ -2.1
USP1O94782 Y_RNA.343-201ENST00000365354 112 ntBASIC1.95□□□□□ -2.1
USP1O94782 Y_RNA.486-201ENST00000384398 107 ntBASIC1.95□□□□□ -2.1
USP1O94782 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USP1O94782 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.95□□□□□ -2.1
USP1O94782 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
USP1O94782 SNORA79-201ENST00000408376 140 ntBASIC1.95□□□□□ -2.1
USP1O94782 RNU6-588P-201ENST00000410281 105 ntBASIC1.95□□□□□ -2.1
USP1O94782 FTH1P12-201ENST00000432137 551 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms