Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ACTN4O43707 RNU6-633P-201ENST00000362612 103 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 RNU6-160P-201ENST00000384591 107 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 MIR591-201ENST00000385290 95 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 AC090844.1-201ENST00000422019 156 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.61□□□□□ -1.83
ACTN4O43707 AL606517.2-201ENST00000442855 241 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 MIR1270-201ENST00000459320 83 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 AC023141.11-201ENST00000508864 202 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 RNA5SP217-201ENST00000515959 91 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 MIR92B-201ENST00000607575 96 ntBASIC3.61□□□□□ -1.83
ACTN4O43707 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
ACTN4O43707 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ACTN4O43707 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.6□□□□□ -1.83
ACTN4O43707 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 Y_RNA.609-201ENST00000410669 89 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 Z92545.1-201ENST00000411782 234 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ACTN4O43707 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 AC015922.2-201ENST00000435593 184 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 RPS27P29-201ENST00000463110 252 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 AC007536.1-201ENST00000533382 349 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 MIR4474-201ENST00000579189 78 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 SNORA51-201ENST00000606420 132 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 AC103810.6-201ENST00000606708 136 ntBASIC3.6□□□□□ -1.83
ACTN4O43707 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTN4O43707 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
ACTN4O43707 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.6□□□□□ -1.83
ACTN4O43707 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTN4O43707 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ACTN4O43707 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ACTN4O43707 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ACTN4O43707 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ACTN4O43707 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
ACTN4O43707 RN7SKP192-201ENST00000411291 327 ntBASIC3.59□□□□□ -1.83
ACTN4O43707 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTN4O43707 RNU6-1006P-201ENST00000516998 103 ntBASIC3.59□□□□□ -1.83
ACTN4O43707 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTN4O43707 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.59□□□□□ -1.83
ACTN4O43707 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ACTN4O43707 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ACTN4O43707 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ACTN4O43707 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ACTN4O43707 Y_RNA.94-201ENST00000363068 106 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 SNORA32-201ENST00000384072 121 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 SNORA70.7-201ENST00000384159 133 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 RNU6-1072P-201ENST00000384703 107 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 RNU6-443P-201ENST00000384780 107 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 RNA5SP109-201ENST00000391010 116 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 SNORA48.8-201ENST00000391324 134 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
ACTN4O43707 RNU7-34P-201ENST00000459394 64 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 RN7SL293P-201ENST00000481765 281 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 SEM1P1-201ENST00000506694 209 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 SNORA28-201ENST00000606769 126 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 AC027279.3-201ENST00000625055 122 ntBASIC3.58□□□□□ -1.84
ACTN4O43707 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ACTN4O43707 Y_RNA.247-201ENST00000364500 92 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 RNA5SP261-201ENST00000410536 106 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.57□□□□□ -1.84
ACTN4O43707 RPS12P2-201ENST00000439728 269 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 AC018868.1-201ENST00000491307 315 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 MIR4429-201ENST00000580105 73 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.57□□□□□ -1.84
ACTN4O43707 MIR6841-201ENST00000637129 72 ntBASIC3.57□□□□□ -1.84
ACTN4O43707 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ACTN4O43707 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ACTN4O43707 SNORA1.2-201ENST00000365189 134 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.56□□□□□ -1.84
ACTN4O43707 AC091153.1-201ENST00000466297 402 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 SNORD59.2-201ENST00000516873 68 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 AC245166.1-201ENST00000521012 253 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 MIR6075-201ENST00000620782 95 ntBASIC3.56□□□□□ -1.84
ACTN4O43707 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.56□□□□□ -1.84
ACTN4O43707 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ACTN4O43707 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.56□□□□□ -1.84
ACTN4O43707 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ACTN4O43707 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ACTN4O43707 MIRLET7C-201ENST00000362160 84 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 SNORA68.1-201ENST00000364537 132 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTN4O43707 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTN4O43707 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.55□□□□□ -1.84
ACTN4O43707 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.55□□□□□ -1.84
ACTN4O43707 RNU7-67P-201ENST00000459003 62 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 RNU7-53P-201ENST00000516705 60 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 RNU6-958P-201ENST00000516995 106 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 MIR3944-201ENST00000581277 108 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 AC005000.2-201ENST00000605468 310 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 MIR8054-201ENST00000620877 86 ntBASIC3.55□□□□□ -1.84
ACTN4O43707 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ACTN4O43707 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.54□□□□□ -1.84
ACTN4O43707 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ACTN4O43707 SNORD38.1-201ENST00000363863 68 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 RNU6-1163P-201ENST00000364516 107 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 SNORA25B-201ENST00000365507 128 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 MIR449B-201ENST00000384995 97 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms