Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MIR548A1-201ENST00000385041 97 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.63□□□□□ -1.99
SRGAP3O43295 RNU6-693P-201ENST00000516134 107 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 Y_RNA.714-201ENST00000517065 90 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 NDUFA5P6-201ENST00000542110 379 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 MIR5002-201ENST00000584713 97 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 AL353149.1-201ENST00000610667 244 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 U6.108-201ENST00000637764 58 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 ZNF720P1-201ENST00000562403 1939 ntBASIC2.63□□□□□ -1.99
SRGAP3O43295 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SRGAP3O43295 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
SRGAP3O43295 SNORA1B-201ENST00000362535 133 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 RNU6-888P-201ENST00000363010 101 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 SNORD24-201ENST00000383884 75 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 MIR144-201ENST00000384886 86 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SRGAP3O43295 MIR1263-201ENST00000408324 86 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 RN7SKP284-201ENST00000411002 343 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 AC063976.4-201ENST00000421971 163 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 AL021397.1-201ENST00000451806 248 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 Y_RNA.649-201ENST00000459077 103 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 AL049830.1-201ENST00000468034 425 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 MIR3613-201ENST00000579844 87 ntBASIC2.62□□□□□ -1.99
SRGAP3O43295 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.62□□□□□ -1.99
SRGAP3O43295 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
SRGAP3O43295 SNORD68-201ENST00000363214 84 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 RNU6-1164P-201ENST00000364428 107 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 AL117342.1-201ENST00000404861 406 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 AC009238.1-201ENST00000442165 424 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 SNRPGP13-201ENST00000442212 177 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 AC009237.6-201ENST00000446969 424 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.61□□□□□ -1.99
SRGAP3O43295 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 RNU6-1149P-201ENST00000516810 97 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 AP002004.2-201ENST00000531656 154 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 MIR219B-201ENST00000637023 88 ntBASIC2.61□□□□□ -1.99
SRGAP3O43295 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.61□□□□□ -1.99
SRGAP3O43295 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SRGAP3O43295 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
SRGAP3O43295 Y_RNA.242-201ENST00000364473 110 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 RNU6-1292P-201ENST00000383856 107 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 RNU6-147P-201ENST00000383983 107 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 RNU6-880P-201ENST00000384526 107 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 RNA5SP236-201ENST00000516169 116 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 AL358944.1-201ENST00000528537 144 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 AC087685.1-201ENST00000587507 141 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 MTND5P18-201ENST00000445624 1801 ntBASIC2.6□□□□□ -1.99
SRGAP3O43295 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SRGAP3O43295 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SRGAP3O43295 AC008555.8-201ENST00000623602 2168 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 MIR548A2-201ENST00000384956 97 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 MIR522-201ENST00000385071 87 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.59□□□□□ -1.99
SRGAP3O43295 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 AL163195.1-201ENST00000496941 348 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 IGKV1-22-201ENST00000524313 326 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.59□□□□□ -1.99
SRGAP3O43295 RNU6-862P-201ENST00000362804 105 ntBASIC2.58□□□□□ -2
SRGAP3O43295 SNORD115-3-201ENST00000363100 82 ntBASIC2.58□□□□□ -2
SRGAP3O43295 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
SRGAP3O43295 MIR518F-201ENST00000384973 87 ntBASIC2.58□□□□□ -2
SRGAP3O43295 MIRLET7F2-201ENST00000385277 83 ntBASIC2.58□□□□□ -2
SRGAP3O43295 SNORD77.3-201ENST00000391113 65 ntBASIC2.58□□□□□ -2
SRGAP3O43295 IGKV3-31-201ENST00000523109 329 ntBASIC2.58□□□□□ -2
SRGAP3O43295 MIR4679-2-201ENST00000578358 77 ntBASIC2.58□□□□□ -2
SRGAP3O43295 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.58□□□□□ -2
SRGAP3O43295 MIR548O-201ENST00000408583 114 ntBASIC2.57□□□□□ -2
SRGAP3O43295 CST2P1-201ENST00000425770 87 ntBASIC2.57□□□□□ -2
SRGAP3O43295 FTH1P12-201ENST00000432137 551 ntBASIC2.57□□□□□ -2
SRGAP3O43295 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
SRGAP3O43295 Z96811.1-201ENST00000445880 108 ntBASIC2.57□□□□□ -2
SRGAP3O43295 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SRGAP3O43295 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.56□□□□□ -2
SRGAP3O43295 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
SRGAP3O43295 RNU6-1298P-201ENST00000362456 101 ntBASIC2.56□□□□□ -2
SRGAP3O43295 RNU6-1084P-201ENST00000362498 107 ntBASIC2.56□□□□□ -2
SRGAP3O43295 RNU6-23P-201ENST00000363283 107 ntBASIC2.56□□□□□ -2
SRGAP3O43295 SNORD14E-201ENST00000364009 85 ntBASIC2.56□□□□□ -2
SRGAP3O43295 Y_RNA.528-201ENST00000384575 108 ntBASIC2.56□□□□□ -2
SRGAP3O43295 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
SRGAP3O43295 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
SRGAP3O43295 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.56□□□□□ -2
SRGAP3O43295 RNA5SP170-201ENST00000517150 101 ntBASIC2.56□□□□□ -2
SRGAP3O43295 IGLV3-17-201ENST00000519099 244 ntBASIC2.56□□□□□ -2
SRGAP3O43295 AC024995.1-201ENST00000523014 93 ntBASIC2.56□□□□□ -2
SRGAP3O43295 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
SRGAP3O43295 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.56□□□□□ -2
SRGAP3O43295 Y_RNA.783-201ENST00000613546 102 ntBASIC2.56□□□□□ -2
SRGAP3O43295 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SRGAP3O43295 RNA5SP493-201ENST00000364115 91 ntBASIC2.55□□□□□ -2
SRGAP3O43295 RNU6-442P-201ENST00000383968 104 ntBASIC2.55□□□□□ -2
SRGAP3O43295 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
SRGAP3O43295 AL445687.1-201ENST00000439946 251 ntBASIC2.55□□□□□ -2
SRGAP3O43295 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms