Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
TRIM38O00635 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM38O00635 Y_RNA.35-201ENST00000362601 101 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 RNA5SP37-201ENST00000365420 130 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 RNU6-484P-201ENST00000384016 107 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 AC027419.1-201ENST00000522976 328 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 AC024995.1-201ENST00000523014 93 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 Y_RNA.757-201ENST00000578934 114 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 MIR3121-201ENST00000579680 77 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 AC006254.2-201ENST00000603259 279 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 AL021707.8-201ENST00000609428 183 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.19□□□□□ -2.06
TRIM38O00635 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM38O00635 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
TRIM38O00635 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM38O00635 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRIM38O00635 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
TRIM38O00635 SNORD114-7-201ENST00000362520 77 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 Y_RNA.114-201ENST00000363265 113 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 RNA5SP99-201ENST00000364020 114 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 RNU1-96P-201ENST00000364163 162 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 Y_RNA.587-201ENST00000391210 103 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 AL023284.1-201ENST00000403956 276 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 RN7SKP101-201ENST00000411376 320 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 AC245047.4-201ENST00000433189 144 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 AC099677.2-201ENST00000436385 175 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 AC069257.2-201ENST00000441819 155 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 MIR5582-201ENST00000579697 68 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 AL670379.3-201ENST00000605040 251 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
TRIM38O00635 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM38O00635 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-862P-201ENST00000362804 105 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-271P-201ENST00000363858 105 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 SNORD58C-201ENST00000365223 64 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-1323P-201ENST00000384025 107 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 MIR873-201ENST00000401120 77 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 SNORD65B-201ENST00000459126 73 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNA5SP233-201ENST00000459153 113 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNVU1-2-201ENST00000516326 135 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-781P-201ENST00000516377 101 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-1061P-201ENST00000516530 99 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 Y_RNA.692-201ENST00000516627 105 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 RNU6-197P-201ENST00000516680 100 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM38O00635 AC133485.4-201ENST00000561835 220 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 SUB1P4-201ENST00000566062 339 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 AC138907.4-201ENST00000570107 226 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 POLR3GP1-201ENST00000594073 261 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
TRIM38O00635 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TRIM38O00635 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM38O00635 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM38O00635 AL356292.1-201ENST00000283110 373 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 MIR450A1-201ENST00000362262 91 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 SNORA27.1-201ENST00000362604 124 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 Y_RNA.120-201ENST00000363304 110 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RNU6-1019P-201ENST00000364424 107 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 SNORD116-21-201ENST00000384507 92 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 Y_RNA.617-201ENST00000410920 90 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 Y_RNA.651-201ENST00000459380 103 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RNU6-437P-201ENST00000459408 95 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RPS26P55-201ENST00000471178 356 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RPL23AP54-201ENST00000495129 419 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 RNU6-63P-201ENST00000516690 95 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM38O00635 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 AC245060.5-201ENST00000610778 3293 ntBASIC2.16□□□□□ -2.06
TRIM38O00635 ZNF355P-201ENST00000427301 3216 ntBASIC2.15□□□□□ -2.06
TRIM38O00635 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 SNORA79-201ENST00000408376 140 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 AC079804.2-201ENST00000490376 200 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 AC024614.2-201ENST00000577584 372 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 MIR5094-201ENST00000578766 85 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 AL049861.1-201ENST00000603130 150 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
TRIM38O00635 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM38O00635 Y_RNA.91-201ENST00000363042 107 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 RNU6-674P-201ENST00000363831 107 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 RNU4-41P-201ENST00000364426 143 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 RNU6-309P-201ENST00000364573 106 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 Y_RNA.432-201ENST00000384087 111 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 Y_RNA.495-201ENST00000384435 112 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 MIRLET7F2-201ENST00000385277 83 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 MIR548A3-201ENST00000385297 97 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM38O00635 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 RPS26P45-201ENST00000471748 340 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 AC131055.1-201ENST00000584626 316 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 AC005972.2-201ENST00000604690 348 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 AL359075.3-201ENST00000613288 217 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
TRIM38O00635 U6.73-201ENST00000619194 103 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms