Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNF223E7ERA6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RNF223E7ERA6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.2□□□□□ -1.9
RNF223E7ERA6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RNF223E7ERA6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RNF223E7ERA6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RNF223E7ERA6 RNA5SP51-201ENST00000364750 119 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 MIR634-201ENST00000385208 97 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 RNA5SP292-201ENST00000390974 118 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 AC074348.1-201ENST00000426503 132 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 RPL23AP6-201ENST00000446637 472 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 BX510359.1-201ENST00000456973 237 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 MIR4474-201ENST00000579189 78 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 AL591424.2-201ENST00000617023 128 ntBASIC3.19□□□□□ -1.9
RNF223E7ERA6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.19□□□□□ -1.9
RNF223E7ERA6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNF223E7ERA6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF223E7ERA6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF223E7ERA6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.18□□□□□ -1.9
RNF223E7ERA6 RNY1P2-201ENST00000364820 117 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 AC004552.1-201ENST00000419089 348 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 AC093423.1-201ENST00000440817 142 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 SNRPGP12-201ENST00000449481 213 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 RPS26P3-201ENST00000470205 348 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 AC090543.2-201ENST00000483963 348 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 AC004057.1-201ENST00000485827 348 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 RNA5SP164-201ENST00000516533 110 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 SNORA18.5-201ENST00000516616 101 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 AC005786.1-201ENST00000588553 154 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.18□□□□□ -1.9
RNF223E7ERA6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNF223E7ERA6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RNF223E7ERA6 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
RNF223E7ERA6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF223E7ERA6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.17□□□□□ -1.9
RNF223E7ERA6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF223E7ERA6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF223E7ERA6 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
RNF223E7ERA6 RNU6-663P-201ENST00000391105 106 ntBASIC3.17□□□□□ -1.9
RNF223E7ERA6 SNORA3C-201ENST00000408792 125 ntBASIC3.17□□□□□ -1.9
RNF223E7ERA6 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
RNF223E7ERA6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.17□□□□□ -1.9
RNF223E7ERA6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNF223E7ERA6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNF223E7ERA6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RNF223E7ERA6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RNF223E7ERA6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.16□□□□□ -1.9
RNF223E7ERA6 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 CD24P4-201ENST00000382840 243 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 RNU6-1237P-201ENST00000384777 107 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RNF223E7ERA6 SNORA59A-201ENST00000459326 152 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 RPS26P15-201ENST00000488067 348 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 SNORD59.2-201ENST00000516873 68 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 CYP3A52P-201ENST00000563326 91 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 AC090897.1-201ENST00000580909 226 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 MIR4536-1-201ENST00000583537 88 ntBASIC3.16□□□□□ -1.9
RNF223E7ERA6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNF223E7ERA6 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.16□□□□□ -1.9
RNF223E7ERA6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RNF223E7ERA6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNF223E7ERA6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF223E7ERA6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RNF223E7ERA6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF223E7ERA6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNF223E7ERA6 RNU6-208P-201ENST00000362431 107 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 SNORA72.6-201ENST00000384520 129 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 RNU6-1241P-201ENST00000384536 107 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 RNU6-1031P-201ENST00000384773 107 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 MIR526A1-201ENST00000384897 85 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RNF223E7ERA6 RNU6-220P-201ENST00000390919 107 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 RNA5SP306-201ENST00000411087 107 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 AC083863.1-201ENST00000438811 231 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF223E7ERA6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.15□□□□□ -1.91
RNF223E7ERA6 RNU6-850P-201ENST00000516934 103 ntBASIC3.15□□□□□ -1.91
RNF223E7ERA6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RNF223E7ERA6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF223E7ERA6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RNF223E7ERA6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RNF223E7ERA6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF223E7ERA6 RNU6-499P-201ENST00000365615 107 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 MIR490-201ENST00000384865 128 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 MIR154-201ENST00000385243 84 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 RNU6-141P-201ENST00000410499 105 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.14□□□□□ -1.91
RNF223E7ERA6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.14□□□□□ -1.91
RNF223E7ERA6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms