Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MIR515-1-201ENST00000384884 83 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORD30.1-201ENST00000391309 70 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA48.8-201ENST00000391324 134 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 AL022718.1-201ENST00000412004 84 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 MIR1270-201ENST00000459320 83 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA25.13-201ENST00000516395 103 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA18.7-201ENST00000516910 131 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-448P-201ENST00000517052 107 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.4□□□□□ -1.87
DNMT3AQ9Y6K1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.242-201ENST00000364473 110 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-471P-201ENST00000383944 106 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 MIR183-201ENST00000384958 110 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 RNA5SP171-201ENST00000391071 115 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 Z92545.1-201ENST00000411782 234 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-687P-201ENST00000516443 89 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 IGKV2-26-201ENST00000518305 343 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 AC007536.1-201ENST00000533382 349 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 AC087685.1-201ENST00000587507 141 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 AC078899.2-201ENST00000595282 212 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 U6.111-201ENST00000636093 83 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 ZNF271P-202ENST00000465539 1970 ntBASIC3.39□□□□□ -1.87
DNMT3AQ9Y6K1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 RNU4-35P-201ENST00000362588 141 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 RN7SKP220-201ENST00000410611 288 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC069257.2-201ENST00000441819 155 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC233266.1-201ENST00000454518 96 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC025518.1-201ENST00000479856 347 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 RNU1-142P-201ENST00000516682 145 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 MIR4778-201ENST00000577635 80 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC242852.1-201ENST00000612151 96 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 AC244015.1-201ENST00000622301 99 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 MIR338-201ENST00000636369 67 ntBASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNMT3AQ9Y6K1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.140-201ENST00000363474 103 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-1244P-201ENST00000363614 108 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 AL445646.1-201ENST00000431784 216 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 RNU7-80P-201ENST00000459562 61 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 UBL5P1-201ENST00000507979 193 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA31.4-201ENST00000516049 129 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-1041P-201ENST00000516254 102 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 AL358944.1-201ENST00000528537 144 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 MIR7975-201ENST00000619350 68 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DNMT3AQ9Y6K1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 MIRLET7A1-201ENST00000362295 80 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNU1-33P-201ENST00000364249 162 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNA5SP72-201ENST00000364442 117 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-540P-201ENST00000384622 101 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.547-201ENST00000384654 119 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 FTH1P12-201ENST00000432137 551 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 ATP5J2P3-201ENST00000451550 258 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNU7-94P-201ENST00000459576 63 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-70P-201ENST00000516438 60 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNU6-1291P-201ENST00000516591 104 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 U6.105-201ENST00000637379 88 ntBASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DNMT3AQ9Y6K1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 MIR126-201ENST00000362291 85 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.171-201ENST00000363760 102 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.299-201ENST00000364973 94 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 Y_RNA.532-201ENST00000384590 113 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AC092427.1-202ENST00000430569 476 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AC099677.2-201ENST00000436385 175 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 RNU7-128P-201ENST00000517247 62 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AC024995.1-201ENST00000523014 93 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AP003484.1-201ENST00000530974 250 ntBASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.35□□□□□ -1.87
DNMT3AQ9Y6K1 MIR3944-201ENST00000581277 108 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms