Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC104435.1-201ENST00000483483 166 ntBASIC2.28□□□□□ -2.04
NR2E3Q9Y5X4 AL163195.1-201ENST00000496941 348 ntBASIC2.28□□□□□ -2.04
NR2E3Q9Y5X4 RNU7-116P-201ENST00000516940 62 ntBASIC2.28□□□□□ -2.04
NR2E3Q9Y5X4 AL021707.8-201ENST00000609428 183 ntBASIC2.28□□□□□ -2.04
NR2E3Q9Y5X4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
NR2E3Q9Y5X4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.23-201ENST00000362496 106 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-674P-201ENST00000363831 107 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-312P-201ENST00000364629 107 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.398-201ENST00000383952 99 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-578P-201ENST00000390980 103 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU4-62P-201ENST00000410125 130 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 SEPT7P4-201ENST00000437076 306 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 AC245047.8-201ENST00000456455 284 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 SNORD13-201ENST00000459299 104 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU7-200P-201ENST00000516105 62 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-561P-201ENST00000516222 102 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 AC084364.2-201ENST00000546924 395 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 SUB1P4-201ENST00000566062 339 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 MIR3683-201ENST00000580847 82 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 MIR4744-201ENST00000581563 82 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 AC091178.2-201ENST00000584401 117 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 AC002984.1-201ENST00000591692 448 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 AL929325.1-201ENST00000603096 117 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-103P-201ENST00000363686 107 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 RNU4-84P-201ENST00000364200 139 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-1130P-201ENST00000365434 107 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-42P-201ENST00000384165 107 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 RNU4-61P-201ENST00000411243 107 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 AC245047.4-201ENST00000433189 144 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 AL392103.1-201ENST00000447000 198 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 MIR4724-201ENST00000579485 89 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 AL391903.3-201ENST00000612158 163 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 MIR6079-201ENST00000635807 62 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.26□□□□□ -2.05
NR2E3Q9Y5X4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 AC008555.8-201ENST00000623602 2168 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-818P-201ENST00000364837 108 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNY1P5-201ENST00000383890 115 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNU4-52P-201ENST00000384209 138 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 SNORA72-201ENST00000384339 132 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 SNORA67.5-201ENST00000391036 107 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RN7SKP101-201ENST00000411376 320 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-437P-201ENST00000459408 95 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RPL23AP54-201ENST00000495129 419 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-346P-201ENST00000516288 111 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 RNA5SP480-201ENST00000516840 109 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.703-201ENST00000516846 111 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 AC109810.1-201ENST00000534066 224 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 MIR6504-201ENST00000613520 61 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NR2E3Q9Y5X4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.540-201ENST00000384638 111 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-406P-201ENST00000516470 107 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-341P-201ENST00000516973 96 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
NR2E3Q9Y5X4 MIR367-201ENST00000362299 68 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 SNORA63D-201ENST00000364359 132 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 MIR520A-201ENST00000384862 85 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 RNU2-40P-201ENST00000410833 196 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 RNU7-121P-201ENST00000516604 62 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 AC100821.1-201ENST00000523153 2479 ntBASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
NR2E3Q9Y5X4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 RNU6-112P-201ENST00000363599 104 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 AL606845.1-201ENST00000404881 255 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 MIR514B-201ENST00000516774 80 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 AL358944.1-201ENST00000528537 144 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 MIR4431-201ENST00000579990 94 ntBASIC2.22□□□□□ -2.05
NR2E3Q9Y5X4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NR2E3Q9Y5X4 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
NR2E3Q9Y5X4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.21□□□□□ -2.06
NR2E3Q9Y5X4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
NR2E3Q9Y5X4 MIR1276-201ENST00000408707 83 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms