Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA11Q9Y5I1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHA11Q9Y5I1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 SNORD72-201ENST00000390994 80 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 RNA5SP467-201ENST00000391274 118 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 AL021397.1-201ENST00000451806 248 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 AC087685.1-201ENST00000587507 141 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 MIR6079-201ENST00000635807 62 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 U6.108-201ENST00000637764 58 ntBASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PCDHA11Q9Y5I1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 AC009238.1-201ENST00000442165 424 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 AC009237.6-201ENST00000446969 424 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHA11Q9Y5I1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 SRIP3-201ENST00000413200 219 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 EDDM3CP-201ENST00000415977 425 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 IGKV1-22-201ENST00000524313 326 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 MTND5P18-201ENST00000445624 1801 ntBASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHA11Q9Y5I1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 Y_RNA.267-201ENST00000364679 109 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 MIR548A2-201ENST00000384956 97 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 MIR548A1-201ENST00000385041 97 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 RN7SL636P-201ENST00000497504 294 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 Y_RNA.666-201ENST00000516187 112 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 RNU1-142P-201ENST00000516682 145 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 RNU6-548P-201ENST00000517083 115 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 AL591926.4-201ENST00000616895 298 ntBASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHA11Q9Y5I1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.97
PCDHA11Q9Y5I1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
PCDHA11Q9Y5I1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 MIR126-201ENST00000362291 85 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 SNRPGP13-201ENST00000442212 177 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 RNU1-131P-201ENST00000458943 161 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-693P-201ENST00000516134 107 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-113P-201ENST00000516653 101 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHA11Q9Y5I1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 AC008555.8-201ENST00000623602 2168 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 SNORD114-30-201ENST00000364448 72 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 U8.9-201ENST00000365667 134 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 SNORD77.3-201ENST00000391113 65 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 AL117342.1-201ENST00000404861 406 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RNA5SP89-201ENST00000410300 108 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RNA5SP492-201ENST00000411330 114 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 HMGN2P3-201ENST00000433603 273 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 HMGN2P5-201ENST00000436882 273 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RN7SL499P-201ENST00000481141 276 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-168P-201ENST00000516189 101 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 AP002004.2-201ENST00000531656 154 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 MIR1273D-201ENST00000577266 86 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PCDHA11Q9Y5I1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 SNORA1B-201ENST00000362535 133 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 RNU6-1255P-201ENST00000363434 112 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 SNORA33-201ENST00000363664 130 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 SNORD114-6-201ENST00000364393 72 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 MIR515-2-201ENST00000384883 83 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 MIR515-1-201ENST00000384884 83 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 MIR522-201ENST00000385071 87 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 FTH1P12-201ENST00000432137 551 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 RNU7-26P-201ENST00000458980 63 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 RNU7-94P-201ENST00000459576 63 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 SCARNA15-202ENST00000516881 127 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 MIR4635-201ENST00000583759 79 ntBASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDHA11Q9Y5I1 SNORD114-1-201ENST00000362705 72 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 MIR518F-201ENST00000384973 87 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 RNA5SP323-201ENST00000391094 133 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 MIR1263-201ENST00000408324 86 ntBASIC2.74□□□□□ -1.97
PCDHA11Q9Y5I1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms