Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-86P-201ENST00000606534 107 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 AL359075.3-201ENST00000613288 217 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 AC005336.3-201ENST00000623833 2679 ntBASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDZRN3Q9UPQ7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 SNORD15B-201ENST00000384714 146 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-141P-201ENST00000410499 105 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 AC090844.1-201ENST00000422019 156 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 RNU7-80P-201ENST00000459562 61 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 AC087685.1-201ENST00000587507 141 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 uc_338.25-201ENST00000613756 156 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 AC093831.2-201ENST00000624393 3427 ntBASIC3.95□□□□□ -1.78
PDZRN3Q9UPQ7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 AC009487.4-201ENST00000624969 3585 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 MIR449A-201ENST00000362113 91 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 Y_RNA.247-201ENST00000364500 92 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 RN7SKP200-201ENST00000410564 320 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 RPS12P2-201ENST00000439728 269 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 RNA5SP310-201ENST00000459084 116 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 RN7SL75P-201ENST00000461926 281 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-928P-201ENST00000516876 104 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 AC078899.2-201ENST00000595282 212 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 AC008739.2-201ENST00000597006 317 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 AL512310.12-203ENST00000640543 90 ntBASIC3.94□□□□□ -1.78
PDZRN3Q9UPQ7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-1163P-201ENST00000364516 107 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA1.1-201ENST00000364671 133 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 Y_RNA.547-201ENST00000384654 119 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA46-201ENST00000384762 135 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 MIR520G-201ENST00000385064 90 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 RPL31P63-201ENST00000422565 375 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 SCARNA18B-201ENST00000458806 135 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-871P-201ENST00000516122 100 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-917P-201ENST00000516294 104 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 GTF3AP2-201ENST00000557014 266 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.93□□□□□ -1.78
PDZRN3Q9UPQ7 AC008163.1-202ENST00000636004 2889 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 Y_RNA.299-201ENST00000364973 94 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-411P-201ENST00000384451 107 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 AL022718.1-201ENST00000412004 84 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 AC108729.3-201ENST00000513484 108 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 MIR449C-201ENST00000516047 92 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA31.4-201ENST00000516049 129 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-948P-201ENST00000516374 107 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-1015P-201ENST00000517121 99 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 AC006441.5-201ENST00000612680 209 ntBASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDZRN3Q9UPQ7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 RNU4-32P-201ENST00000363404 141 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA54-201ENST00000384281 123 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 RNU6-613P-201ENST00000410412 108 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 AL139132.1-201ENST00000431587 344 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 AL445646.1-201ENST00000431784 216 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 SNORA18.7-201ENST00000516910 131 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 AC013412.1-201ENST00000610687 192 ntBASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.91□□□□□ -1.78
PDZRN3Q9UPQ7 AL355596.1-201ENST00000565399 3996 ntBASIC3.9□□□□□ -1.78
PDZRN3Q9UPQ7 SNORD115-37-201ENST00000363768 82 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 RNU1-57P-201ENST00000384491 166 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-851P-201ENST00000384565 107 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 AC069257.2-201ENST00000441819 155 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 MIR1270-201ENST00000459320 83 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 RNU6-498P-201ENST00000459468 107 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 SEPT14P17-201ENST00000617978 177 ntBASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PDZRN3Q9UPQ7 AC092435.3-201ENST00000565538 3654 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 Y_RNA.140-201ENST00000363474 103 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 POLR2J4-204ENST00000418424 324 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 AP003484.1-201ENST00000530974 250 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 HMGN2P15-201ENST00000585707 270 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 AC104984.5-201ENST00000586878 94 ntBASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDZRN3Q9UPQ7 RNU2-59P-201ENST00000410482 191 ntBASIC3.88□□□□□ -1.79
PDZRN3Q9UPQ7 RNA5SP38-201ENST00000410750 119 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms