Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AC245047.8-201ENST00000456455 284 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNU7-116P-201ENST00000516940 62 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 AC015720.1-201ENST00000565251 277 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 MIR3910-1-201ENST00000580936 111 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 MIR4438-201ENST00000585271 93 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 AL359075.3-201ENST00000613288 217 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 U6.73-201ENST00000619194 103 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 AL157777.2-201ENST00000258070 137 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNU6-862P-201ENST00000362804 105 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNU4-84P-201ENST00000364200 139 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.357-201ENST00000365487 109 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 SNORD116-18-201ENST00000383961 92 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNU6-136P-201ENST00000384663 107 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 EBAG9P1-201ENST00000418955 543 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 AL162725.1-201ENST00000435405 301 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 AC097462.1-201ENST00000514125 324 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNA5SP445-201ENST00000515889 115 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNU6-1007P-201ENST00000516586 107 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 RNU1-142P-201ENST00000516682 145 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 BX248123.2-201ENST00000606318 124 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCAF8Q9UPN6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
SCAF8Q9UPN6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCAF8Q9UPN6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCAF8Q9UPN6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SCAF8Q9UPN6 RNU4-13P-201ENST00000364019 141 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 RNU6-417P-201ENST00000384712 107 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 MT-TT-201ENST00000387460 66 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 AC099677.2-201ENST00000436385 175 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 RPL23AP54-201ENST00000495129 419 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 RNU7-172P-201ENST00000517125 64 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 AC109810.1-201ENST00000534066 224 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 SUB1P4-201ENST00000566062 339 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 AL391903.3-201ENST00000612158 163 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
SCAF8Q9UPN6 MIR499A-201ENST00000384903 122 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 MIR489-201ENST00000384923 84 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 AC245517.4-201ENST00000448601 281 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 RNU6-437P-201ENST00000459408 95 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 RNU7-99P-201ENST00000516271 62 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 MIR4431-201ENST00000579990 94 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 U2.22-201ENST00000636441 106 ntBASIC2.14□□□□□ -2.07
SCAF8Q9UPN6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 RNU6-449P-201ENST00000383914 107 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 AL606845.1-201ENST00000404881 255 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 RNU7-95P-201ENST00000459222 64 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 MTND1P7-201ENST00000632801 297 ntBASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SCAF8Q9UPN6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 AC245060.5-201ENST00000610778 3293 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNU6-674P-201ENST00000363831 107 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 SNORA25.9-201ENST00000365087 128 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 SNORA72-201ENST00000384339 132 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNU6-376P-201ENST00000384731 106 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 SNORA19-201ENST00000384737 128 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 MIR562-201ENST00000384894 95 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 MIR613-201ENST00000385248 95 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNU6-239P-201ENST00000390990 99 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNA5SP323-201ENST00000391094 133 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 MIR1278-201ENST00000408753 81 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RPS4XP11-201ENST00000446897 772 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNU6-561P-201ENST00000516222 102 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 MIR5094-201ENST00000578766 85 ntBASIC2.12□□□□□ -2.07
SCAF8Q9UPN6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 RNU6-818P-201ENST00000364837 108 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 MIR520A-201ENST00000384862 85 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 TMSB4XP3-201ENST00000445144 114 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 AL121914.1-201ENST00000450188 156 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 RPS26P45-201ENST00000471748 340 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 RNU7-121P-201ENST00000516604 62 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 AL929325.1-201ENST00000603096 117 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 AL645939.4-201ENST00000604495 135 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
SCAF8Q9UPN6 RNU6-704P-201ENST00000364162 103 ntBASIC2.1□□□□□ -2.07
SCAF8Q9UPN6 RNU4-41P-201ENST00000364426 143 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms