Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC022217.4-201ENST00000604389 163 ntBASIC2.41□□□□□ -2.02
SYNPO2Q9UMS6 uc_338.4-201ENST00000616635 176 ntBASIC2.41□□□□□ -2.02
SYNPO2Q9UMS6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SYNPO2Q9UMS6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
SYNPO2Q9UMS6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-1336P-201ENST00000383886 109 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-484P-201ENST00000384016 107 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNY3P5-201ENST00000384127 102 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-768P-201ENST00000384683 107 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNA5SP109-201ENST00000391010 116 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 MIR1283-2-201ENST00000408621 87 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 NDUFA4P2-201ENST00000489989 244 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-426P-201ENST00000516464 97 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 MIR4448-201ENST00000584360 86 ntBASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
SYNPO2Q9UMS6 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 MIR518A2-201ENST00000384966 87 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 HMGN2P39-201ENST00000398005 273 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 MLLT10P1-201ENST00000418346 262 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 HMGN2P19-201ENST00000425149 265 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 snoU13.23-201ENST00000458863 104 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 RNA5SP182-201ENST00000516064 82 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 MIR5094-201ENST00000578766 85 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 MIR2681-201ENST00000581814 105 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 DNAJC19P2-201ENST00000593340 302 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 MIR7843-201ENST00000622274 79 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 SNORA20-201ENST00000384662 132 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 MIR562-201ENST00000384894 95 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 MIR569-201ENST00000385228 96 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 RNU4-43P-201ENST00000410628 137 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 AL606753.1-201ENST00000427435 87 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 SNRPGP10-201ENST00000432323 225 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 RPS27P1-201ENST00000450552 247 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 RNU7-94P-201ENST00000459576 63 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 HMGN1P7-201ENST00000491722 313 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 RNU7-149P-201ENST00000516739 59 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 AC084364.2-201ENST00000546924 395 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 JPX_2.1-201ENST00000614161 69 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 AL591926.4-201ENST00000616895 298 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SYNPO2Q9UMS6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.497-201ENST00000384447 98 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 MIR1289-2-201ENST00000408360 111 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-588P-201ENST00000410281 105 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 TMSB4XP3-201ENST00000445144 114 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 AL049830.1-201ENST00000468034 425 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 SNORD77.4-201ENST00000516158 81 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 SNORA25.12-201ENST00000516202 82 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 Pinc.1-201ENST00000616452 154 ntBASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SYNPO2Q9UMS6 MIR126-201ENST00000362291 85 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.568-201ENST00000384742 113 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 SNORD72-201ENST00000390994 80 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 DEFB122-202ENST00000569013 197 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 AC132825.6-201ENST00000638861 357 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 ICE2P2-201ENST00000483823 2787 ntBASIC2.36□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 SNORD37.2-201ENST00000391075 66 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 AC019129.1-201ENST00000403786 261 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 AC245047.4-201ENST00000433189 144 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 RPL23AP42-201ENST00000471152 471 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 RNU6-197P-201ENST00000516680 100 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 MIR548X2-201ENST00000579776 100 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 MIR378D2-201ENST00000580636 98 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 MIR3124-201ENST00000582636 67 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 AC120024.3-201ENST00000603167 156 ntBASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
SYNPO2Q9UMS6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.634-201ENST00000364811 113 ntBASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 Y_RNA.343-201ENST00000365354 112 ntBASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 SNORD50.2-201ENST00000365465 70 ntBASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 SNORA26.9-201ENST00000391322 122 ntBASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 AC245047.3-201ENST00000429428 127 ntBASIC2.34□□□□□ -2.03
SYNPO2Q9UMS6 AC023449.1-201ENST00000454464 154 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms