Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CNTN3Q9P232 AL138827.1-201ENST00000402666 306 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.01□□□□□ -1.93
CNTN3Q9P232 AC245047.3-201ENST00000429428 127 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 SNRPGP14-201ENST00000435400 219 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU7-70P-201ENST00000516941 66 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 AC005786.1-201ENST00000588553 154 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CNTN3Q9P232 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CNTN3Q9P232 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CNTN3Q9P232 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.01□□□□□ -1.93
CNTN3Q9P232 ZNF720P1-201ENST00000562403 1939 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 AC062016.1-201ENST00000355719 319 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 Y_RNA.37-201ENST00000362606 108 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 RNU1-112P-201ENST00000364401 164 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 Y_RNA.547-201ENST00000384654 119 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 MIR9-1-201ENST00000385198 89 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
CNTN3Q9P232 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3□□□□□ -1.93
CNTN3Q9P232 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3□□□□□ -1.93
CNTN3Q9P232 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
CNTN3Q9P232 RNU7-25P-201ENST00000516544 62 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 MIR4319-201ENST00000577285 85 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3□□□□□ -1.93
CNTN3Q9P232 MIR6852-201ENST00000621699 66 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 MIR376A2-201ENST00000636782 80 ntBASIC3□□□□□ -1.93
CNTN3Q9P232 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CNTN3Q9P232 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CNTN3Q9P232 SNORA80E-201ENST00000384744 137 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
CNTN3Q9P232 AL445646.1-201ENST00000431784 216 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 AC087499.4-201ENST00000448505 178 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 AC003982.1-202ENST00000469928 248 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 MIR4672-201ENST00000583126 81 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 AC006023.1-201ENST00000603944 259 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 SNORA28-201ENST00000606769 126 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.99□□□□□ -1.93
CNTN3Q9P232 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CNTN3Q9P232 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CNTN3Q9P232 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CNTN3Q9P232 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTN3Q9P232 MIR26A1-201ENST00000362205 77 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 RNU6-1107P-201ENST00000364817 104 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 Y_RNA.495-201ENST00000384435 112 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 AC108938.1-201ENST00000451204 136 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 RPS29P24-201ENST00000486345 171 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.98□□□□□ -1.93
CNTN3Q9P232 MIR3162-201ENST00000581818 82 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 RPL12P50-201ENST00000603116 116 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
CNTN3Q9P232 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTN3Q9P232 Y_RNA.85-201ENST00000363014 111 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 VTRNA1-1-201ENST00000363120 99 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 Y_RNA.198-201ENST00000364013 98 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 SNORD12C-201ENST00000386307 89 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 MIR759-201ENST00000390224 91 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 RNA5SP184-201ENST00000411071 108 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 RNU6-240P-201ENST00000516098 97 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 MIR4778-201ENST00000577635 80 ntBASIC2.97□□□□□ -1.93
CNTN3Q9P232 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CNTN3Q9P232 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CNTN3Q9P232 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNU1-58P-201ENST00000362413 163 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNY4P6-201ENST00000363667 96 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNU6-1019P-201ENST00000364424 107 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNU6-690P-201ENST00000365242 106 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNU6-106P-201ENST00000384405 107 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 AC069257.2-201ENST00000441819 155 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 SNORD109B-201ENST00000458961 67 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 SNORD109A-201ENST00000459128 67 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 RNU7-80P-201ENST00000459562 61 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.96□□□□□ -1.94
CNTN3Q9P232 MIR4658-201ENST00000584344 65 ntBASIC2.96□□□□□ -1.94
CNTN3Q9P232 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CNTN3Q9P232 AC108206.1-201ENST00000570186 4159 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 RNU6-349P-201ENST00000362402 107 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 Y_RNA.213-201ENST00000364178 111 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 Y_RNA.440-201ENST00000384120 114 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 Y_RNA.454-201ENST00000384224 113 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 RNU6-440P-201ENST00000390882 105 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 AP003484.1-201ENST00000530974 250 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 MIR3605-201ENST00000583214 100 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 uc_338.28-201ENST00000612082 187 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 MIR8054-201ENST00000620877 86 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 AL365361.1-201ENST00000566942 3481 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.95□□□□□ -1.94
CNTN3Q9P232 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CNTN3Q9P232 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
CNTN3Q9P232 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
CNTN3Q9P232 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CNTN3Q9P232 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CNTN3Q9P232 MIR450A1-201ENST00000362262 91 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 Y_RNA.49-201ENST00000362714 112 ntBASIC2.94□□□□□ -1.94
CNTN3Q9P232 RNU6-859P-201ENST00000362728 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms