Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 Y_RNA.121-201ENST00000363309 113 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 RNU6-112P-201ENST00000363599 104 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 RNU6-682P-201ENST00000363843 106 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 SNORA4.2-201ENST00000365313 147 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 Y_RNA.435-201ENST00000384095 112 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 RNU6-209P-201ENST00000384118 107 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 MIR676-201ENST00000390702 67 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 AL606845.1-201ENST00000404881 255 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 STAG3L5P-204ENST00000443759 179 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 Y_RNA.662-201ENST00000516028 97 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 RNU6-548P-201ENST00000517083 115 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 AL591926.4-201ENST00000616895 298 ntBASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CALCOCO1Q9P1Z2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CALCOCO1Q9P1Z2 SNORA63D-201ENST00000364359 132 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 SNORA12.1-201ENST00000390873 148 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 RPL31P63-201ENST00000422565 375 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP437-201ENST00000517249 129 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AL391903.3-201ENST00000612158 163 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 AL353997.5-201ENST00000618886 171 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 U6.106-201ENST00000636360 105 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-578P-201ENST00000390980 103 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 RN7SKP200-201ENST00000410564 320 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 RN7SKP101-201ENST00000411376 320 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 HSPE1P9-201ENST00000440046 311 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 AL121914.1-201ENST00000450188 156 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 SNORA31.10-201ENST00000516482 106 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-886P-201ENST00000384319 105 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-296P-201ENST00000384608 107 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-950P-201ENST00000384651 107 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.555-201ENST00000384673 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-131P-201ENST00000391144 107 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP482-201ENST00000391269 118 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP100-201ENST00000410903 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP59-201ENST00000410922 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.622-201ENST00000411091 108 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 AC009310.1-201ENST00000414414 451 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU7-34P-201ENST00000459394 64 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 AC074198.2-201ENST00000508153 258 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 SNORA28-201ENST00000606769 126 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 AC108706.1-201ENST00000611053 297 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 uc_338.4-201ENST00000616635 176 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
CALCOCO1Q9P1Z2 U8.13-201ENST00000390842 128 ntBASIC2.12□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU7-28P-201ENST00000516759 62 ntBASIC2.12□□□□□ -2.07
CALCOCO1Q9P1Z2 AC109810.1-201ENST00000534066 224 ntBASIC2.12□□□□□ -2.07
CALCOCO1Q9P1Z2 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
CALCOCO1Q9P1Z2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.12□□□□□ -2.07
CALCOCO1Q9P1Z2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-275P-201ENST00000364910 107 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-728P-201ENST00000365375 104 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 SNORD11-201ENST00000459124 84 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 RNU6-561P-201ENST00000516222 102 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP481-201ENST00000516814 122 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 SNORA31.17-201ENST00000516953 127 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 AL021707.8-201ENST00000609428 183 ntBASIC2.11□□□□□ -2.07
CALCOCO1Q9P1Z2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 RNY3P5-201ENST00000384127 102 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 MIR522-201ENST00000385071 87 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 MIR548I3-201ENST00000408378 149 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 MIR548I1-201ENST00000408810 149 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 RNA5SP458-201ENST00000516188 119 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
CALCOCO1Q9P1Z2 Y_RNA.357-201ENST00000365487 109 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms