Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SNORD50B-201ENST00000364995 70 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RNU6-1117P-201ENST00000384525 104 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 MIR548I2-201ENST00000408348 149 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP501-201ENST00000410990 112 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 HSPE1P9-201ENST00000440046 311 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 AC069257.2-201ENST00000441819 155 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 Y_RNA.666-201ENST00000516187 112 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 SNORA31.10-201ENST00000516482 106 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RNU6-504P-201ENST00000516568 104 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RNU6-1270P-201ENST00000517128 108 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KCMF1Q9P0J7 ICE2P2-201ENST00000483823 2787 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 U8.5-201ENST00000364528 136 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 Y_RNA.251-201ENST00000364551 99 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 SNORA48.1-201ENST00000390879 135 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 Y_RNA.584-201ENST00000391090 114 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 AC008413.1-201ENST00000511864 177 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 RNU7-28P-201ENST00000516759 62 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 RNU6-971P-201ENST00000516920 106 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 AC007751.1-201ENST00000529260 376 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 MIR4762-201ENST00000585261 75 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
KCMF1Q9P0J7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 SNORD14E-201ENST00000364009 85 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 SNORA4.2-201ENST00000365313 147 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 SNORD61-201ENST00000384252 73 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 RNU2-7P-201ENST00000410794 178 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AL158823.1-201ENST00000418441 478 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 RNU6-1211P-201ENST00000459179 105 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AP001328.1-201ENST00000528550 176 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 AC011603.4-201ENST00000611325 277 ntBASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
KCMF1Q9P0J7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 RNA5SP289-201ENST00000362332 137 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 Y_RNA.291-201ENST00000364886 113 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 RNU6-693P-201ENST00000516134 107 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 SNORA18.4-201ENST00000516440 124 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 SNORD45.4-201ENST00000516629 73 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 MIR3129-201ENST00000581095 76 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 SNORA28-201ENST00000606769 126 ntBASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
KCMF1Q9P0J7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 SNORA63D-201ENST00000364359 132 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 RNU6-915P-201ENST00000364943 103 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 RNU6-442P-201ENST00000383968 104 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 SNORA1-201ENST00000384107 130 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 SNRPGP13-201ENST00000442212 177 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 SUB1P4-201ENST00000566062 339 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 TUG1_4.1-201ENST00000619464 181 ntBASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
KCMF1Q9P0J7 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RNU1-51P-201ENST00000365345 176 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 SNORD24-201ENST00000383884 75 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RNU6-22P-201ENST00000384355 107 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 MIR520A-201ENST00000384862 85 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RN7SKP200-201ENST00000410564 320 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RNU6-62P-201ENST00000516526 102 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RNA5SP437-201ENST00000517249 129 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 MIR548AI-201ENST00000579940 88 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 MIR3124-201ENST00000582636 67 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 AL590808.1-201ENST00000618696 141 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 AP001340.1-201ENST00000624405 217 ntBASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KCMF1Q9P0J7 RNU6-888P-201ENST00000363010 101 ntBASIC2.22□□□□□ -2.05
KCMF1Q9P0J7 RNU6-163P-201ENST00000384396 106 ntBASIC2.22□□□□□ -2.05
KCMF1Q9P0J7 AL034345.1-201ENST00000407768 123 ntBASIC2.22□□□□□ -2.05
KCMF1Q9P0J7 RNA5SP127-201ENST00000411051 133 ntBASIC2.22□□□□□ -2.05
KCMF1Q9P0J7 RNA5SP450-201ENST00000411206 102 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms