Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
MKS1Q9NXB0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 MIR660-201ENST00000385235 97 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 RNU6-907P-201ENST00000390924 102 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 MIR1267-201ENST00000408723 78 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 AL161935.2-201ENST00000414627 60 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 PIGPP3-201ENST00000425307 415 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 AC114811.1-201ENST00000507207 168 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 RNU7-149P-201ENST00000516739 59 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.07□□□□□ -2.08
MKS1Q9NXB0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.07□□□□□ -2.08
MKS1Q9NXB0 AC072026.1-201ENST00000605023 201 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 AC004792.1-201ENST00000614523 137 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 MIR8074-201ENST00000615081 81 ntBASIC2.07□□□□□ -2.08
MKS1Q9NXB0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
MKS1Q9NXB0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.233-201ENST00000364407 101 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 AC004965.1-201ENST00000413033 213 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RPL31P63-201ENST00000422565 375 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 UBE2DNL-203ENST00000474922 222 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 AC107393.1-201ENST00000512403 346 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RNU6-182P-201ENST00000516970 105 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 AC022559.1-201ENST00000520905 205 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 SNORA77B-201ENST00000578179 125 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
MKS1Q9NXB0 RNU6-833P-201ENST00000363486 107 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 RNU6-578P-201ENST00000390980 103 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 SNORD72-201ENST00000390994 80 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 RNU2-64P-201ENST00000411315 191 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.05□□□□□ -2.08
MKS1Q9NXB0 RNU7-120P-201ENST00000459334 63 ntBASIC2.05□□□□□ -2.08
MKS1Q9NXB0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
MKS1Q9NXB0 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 MIR891A-201ENST00000401237 79 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 RNU2-55P-201ENST00000411146 174 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 HMGN2P32-201ENST00000444648 269 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 SNRPGP8-201ENST00000454064 226 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.04□□□□□ -2.08
MKS1Q9NXB0 MIR4662B-201ENST00000579498 81 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 AC108706.1-201ENST00000611053 297 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 Pinc.1-201ENST00000616452 154 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.04□□□□□ -2.08
MKS1Q9NXB0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.336-201ENST00000365307 109 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 RNU6-728P-201ENST00000365375 104 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 SUMO2P12-201ENST00000405924 140 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.03□□□□□ -2.08
MKS1Q9NXB0 AC093850.1-201ENST00000454121 251 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 HMGN2P23-201ENST00000456759 269 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 SNORA59A-201ENST00000459326 152 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 RNU6-561P-201ENST00000516222 102 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 SNORA44.1-201ENST00000517031 108 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 AC109810.1-201ENST00000534066 224 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 MIR4778-201ENST00000577635 80 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 U6.106-201ENST00000636360 105 ntBASIC2.03□□□□□ -2.08
MKS1Q9NXB0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
MKS1Q9NXB0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
MKS1Q9NXB0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.03□□□□□ -2.08
MKS1Q9NXB0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 RNU6-275P-201ENST00000364910 107 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 RNU6-442P-201ENST00000383968 104 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 MIR30A-201ENST00000385092 71 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 MIR802-201ENST00000390235 94 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.02□□□□□ -2.09
MKS1Q9NXB0 RNA5SP289-201ENST00000362332 137 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 RNU4-82P-201ENST00000362443 140 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 RNU6-484P-201ENST00000384016 107 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.01□□□□□ -2.09
MKS1Q9NXB0 RNU6-126P-201ENST00000516685 103 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 SUMO2P16-201ENST00000519475 264 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 MRPS18CP4-201ENST00000535821 231 ntBASIC2.01□□□□□ -2.09
MKS1Q9NXB0 SNORD45.3-201ENST00000363836 72 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 RNU6-682P-201ENST00000363843 106 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 Y_RNA.432-201ENST00000384087 111 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 Y_RNA.486-201ENST00000384398 107 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 MIR15B-201ENST00000385045 98 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 AL121914.1-201ENST00000450188 156 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 RNU6-861P-201ENST00000516745 106 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 IGKV3-31-201ENST00000523109 329 ntBASIC2□□□□□ -2.09
MKS1Q9NXB0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
MKS1Q9NXB0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MKS1Q9NXB0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MKS1Q9NXB0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MKS1Q9NXB0 MIR449A-201ENST00000362113 91 ntBASIC1.99□□□□□ -2.09
MKS1Q9NXB0 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
MKS1Q9NXB0 RNU4-43P-201ENST00000410628 137 ntBASIC1.99□□□□□ -2.09
MKS1Q9NXB0 SNRPGP14-201ENST00000435400 219 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms