Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TDP1Q9NUW8 AC005336.3-201ENST00000623833 2679 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 RNU6-950P-201ENST00000384651 107 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 MIR15B-201ENST00000385045 98 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 U8.13-201ENST00000390842 128 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 RNU6-482P-201ENST00000391068 107 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 RN7SKP200-201ENST00000410564 320 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 Y_RNA.622-201ENST00000411091 108 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 RNU5E-9P-201ENST00000411164 104 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 AL121914.1-201ENST00000450188 156 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.13□□□□□ -2.07
TDP1Q9NUW8 MIR4762-201ENST00000585261 75 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 SNORA28-201ENST00000606769 126 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
TDP1Q9NUW8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
TDP1Q9NUW8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TDP1Q9NUW8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 SNORD45.3-201ENST00000363836 72 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 U8.5-201ENST00000364528 136 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 RNU6-728P-201ENST00000365375 104 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 RNU6-131P-201ENST00000391144 107 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 AC019129.1-201ENST00000403786 261 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 FTH1P12-201ENST00000432137 551 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 SEPT7P4-201ENST00000437076 306 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 SNRPGP8-201ENST00000454064 226 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 RNA5SP57-201ENST00000459463 123 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 RNA5SP481-201ENST00000516814 122 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 RNU6-295P-201ENST00000516901 104 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.12□□□□□ -2.07
TDP1Q9NUW8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.12□□□□□ -2.07
TDP1Q9NUW8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TDP1Q9NUW8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 Y_RNA.441-201ENST00000384123 112 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 snoU13.27-201ENST00000459278 104 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 RNU7-149P-201ENST00000516739 59 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.11□□□□□ -2.07
TDP1Q9NUW8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TDP1Q9NUW8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TDP1Q9NUW8 AL596028.1-201ENST00000326971 197 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 RNU6-484P-201ENST00000384016 107 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 Y_RNA.464-201ENST00000384282 110 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 RNU6-1031P-201ENST00000384773 107 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 RNU4-43P-201ENST00000410628 137 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 RNU2-55P-201ENST00000411146 174 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 HMGN2P23-201ENST00000456759 269 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 RNU7-34P-201ENST00000459394 64 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.1□□□□□ -2.07
TDP1Q9NUW8 Y_RNA.714-201ENST00000517065 90 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.1□□□□□ -2.07
TDP1Q9NUW8 MIR4709-201ENST00000577272 72 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 MIR4431-201ENST00000579990 94 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 AC008507.4-201ENST00000585464 127 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 AC087685.1-201ENST00000587507 141 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.1□□□□□ -2.07
TDP1Q9NUW8 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
TDP1Q9NUW8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
TDP1Q9NUW8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TDP1Q9NUW8 RNU6-1138P-201ENST00000365359 106 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 SNORD72-201ENST00000390994 80 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 RNU6-1135P-201ENST00000411083 103 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 RNU6-1299P-201ENST00000516316 100 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 AC104465.1-201ENST00000611365 139 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
TDP1Q9NUW8 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.08
TDP1Q9NUW8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
TDP1Q9NUW8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.08□□□□□ -2.08
TDP1Q9NUW8 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNA5SP99-201ENST00000364020 114 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 SNORD50B-201ENST00000364995 70 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNU6-1062P-201ENST00000383908 107 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.432-201ENST00000384087 111 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNA5SP212-201ENST00000391223 107 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNU6-394P-201ENST00000410735 107 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 CALM2P4-201ENST00000430810 426 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 AC005840.1-201ENST00000498412 377 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNA5SP182-201ENST00000516064 82 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
TDP1Q9NUW8 Pinc.1-201ENST00000616452 154 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.08□□□□□ -2.08
TDP1Q9NUW8 RNU4-84P-201ENST00000364200 139 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 Y_RNA.357-201ENST00000365487 109 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 RNU6-643P-201ENST00000384018 107 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 U8.16-201ENST00000391279 133 ntBASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.07□□□□□ -2.08
TDP1Q9NUW8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms