Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORD68-201ENST00000363214 84 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORD56.5-201ENST00000364281 72 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORA68.1-201ENST00000364537 132 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 RNU6-690P-201ENST00000365242 106 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 Y_RNA.332-201ENST00000365271 113 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORA2.2-201ENST00000365473 135 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORD24-201ENST00000383884 75 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 MIR518F-201ENST00000384973 87 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 MIR9-1-201ENST00000385198 89 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 RNU6-440P-201ENST00000390882 105 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.29□□□□□ -1.88
EFCC1Q9HA90 SNORA40.13-201ENST00000516379 120 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 RNA5SP281-201ENST00000516504 135 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 RNU6-844P-201ENST00000517175 102 ntBASIC3.29□□□□□ -1.88
EFCC1Q9HA90 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
EFCC1Q9HA90 MIR340-201ENST00000362125 95 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 SNORA33-201ENST00000363664 130 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 Y_RNA.388-201ENST00000383919 113 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 RNU6-970P-201ENST00000516312 107 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 RNY4P20-201ENST00000516678 93 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 RNU6-762P-201ENST00000517107 102 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.28□□□□□ -1.88
EFCC1Q9HA90 AL359075.3-201ENST00000613288 217 ntBASIC3.28□□□□□ -1.88
EFCC1Q9HA90 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.27□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.49-201ENST00000362714 112 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 RNU1-112P-201ENST00000364401 164 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 SNORA67.4-201ENST00000384688 142 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR759-201ENST00000390224 91 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR548O-201ENST00000408583 114 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 UBBP3-201ENST00000445497 241 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 AL049830.1-201ENST00000468034 425 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 RNU1-142P-201ENST00000516682 145 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 RNU7-70P-201ENST00000516941 66 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.714-201ENST00000517065 90 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 RNU7-128P-201ENST00000517247 62 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR3670-2-201ENST00000582974 65 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR3670-1-201ENST00000584160 65 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR3670-3-201ENST00000584855 65 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 AL355297.2-201ENST00000604792 129 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 MIR3670-4-201ENST00000612260 65 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
EFCC1Q9HA90 AC018630.2-201ENST00000534866 2403 ntBASIC3.27□□□□□ -1.89
EFCC1Q9HA90 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
EFCC1Q9HA90 RNU6-1084P-201ENST00000362498 107 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 SNORA3.2-201ENST00000408221 125 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 SNORA19.1-201ENST00000410656 129 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 RNY4P29-201ENST00000410801 97 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.26□□□□□ -1.89
EFCC1Q9HA90 CYP2C59P-201ENST00000457790 269 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 AC023141.11-201ENST00000508864 202 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 RNA5SP148-201ENST00000516527 94 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.26□□□□□ -1.89
EFCC1Q9HA90 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.26□□□□□ -1.89
EFCC1Q9HA90 ZNF658B-202ENST00000615961 3375 ntBASIC3.26□□□□□ -1.89
EFCC1Q9HA90 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.362-201ENST00000365518 110 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 RNU6-1113P-201ENST00000384348 107 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 SNORA8-201ENST00000384574 139 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 MIR590-201ENST00000385008 97 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 U8.17-201ENST00000391292 132 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 Z96811.1-201ENST00000445880 108 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 snoU13.23-201ENST00000458863 104 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 RNU6-341P-201ENST00000516973 96 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 SUMO2P16-201ENST00000519475 264 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 AC141557.1-201ENST00000540982 400 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 MIR5197-201ENST00000583721 112 ntBASIC3.25□□□□□ -1.89
EFCC1Q9HA90 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
EFCC1Q9HA90 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
EFCC1Q9HA90 SNORA1B-201ENST00000362535 133 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.198-201ENST00000364013 98 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.213-201ENST00000364178 111 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNY1P7-201ENST00000384743 110 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNU11-5P-201ENST00000391216 129 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNA5SP274-201ENST00000410484 108 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNU6-830P-201ENST00000516353 107 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNU7-25P-201ENST00000516544 62 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNU6-667P-201ENST00000517186 102 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 IGKV3-31-201ENST00000523109 329 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
EFCC1Q9HA90 AC021443.1-201ENST00000604478 211 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 MIR338-201ENST00000636369 67 ntBASIC3.24□□□□□ -1.89
EFCC1Q9HA90 RNY4P6-201ENST00000363667 96 ntBASIC3.23□□□□□ -1.89
EFCC1Q9HA90 RNU6-1189P-201ENST00000383958 107 ntBASIC3.23□□□□□ -1.89
EFCC1Q9HA90 MIR522-201ENST00000385071 87 ntBASIC3.23□□□□□ -1.89
EFCC1Q9HA90 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.23□□□□□ -1.89
EFCC1Q9HA90 Y_RNA.676-201ENST00000516393 96 ntBASIC3.23□□□□□ -1.89
EFCC1Q9HA90 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.23□□□□□ -1.89
EFCC1Q9HA90 AC134878.1-201ENST00000619901 243 ntBASIC3.23□□□□□ -1.89
EFCC1Q9HA90 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.23□□□□□ -1.89
EFCC1Q9HA90 MIR342-201ENST00000362212 99 ntBASIC3.22□□□□□ -1.89
EFCC1Q9HA90 SNORD14E-201ENST00000364009 85 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms