Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-136P-201ENST00000384663 107 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.563-201ENST00000384707 108 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 SNORA75.5-201ENST00000391291 81 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 AC019129.1-201ENST00000403786 261 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 AC123900.1-201ENST00000420390 96 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 MTCO1P44-201ENST00000441935 243 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 AL357134.1-201ENST00000445848 426 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
EBF3Q9H4W6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
EBF3Q9H4W6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF3Q9H4W6 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 RNU6-235P-201ENST00000362644 107 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.08□□□□□ -2.08
EBF3Q9H4W6 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF3Q9H4W6 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 RNU6-667P-201ENST00000517186 102 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.08□□□□□ -2.08
EBF3Q9H4W6 MIR378D2-201ENST00000580636 98 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 AL049861.1-201ENST00000603130 150 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 U7.2-201ENST00000607576 63 ntBASIC2.08□□□□□ -2.08
EBF3Q9H4W6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.08□□□□□ -2.08
EBF3Q9H4W6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EBF3Q9H4W6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
EBF3Q9H4W6 MIR340-201ENST00000362125 95 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 SNORA63.4-201ENST00000362763 126 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RNU6-508P-201ENST00000363231 103 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RNU6-271P-201ENST00000363858 105 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RNU4-41P-201ENST00000364426 143 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 SRIP3-201ENST00000413200 219 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 AC008134.1-201ENST00000420943 193 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RPS4XP11-201ENST00000446897 772 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 AC245102.2-201ENST00000448956 180 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RNU6-197P-201ENST00000516680 100 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 RNU7-116P-201ENST00000516940 62 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 AC006435.5-201ENST00000624486 112 ntBASIC2.07□□□□□ -2.08
EBF3Q9H4W6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.91-201ENST00000363042 107 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNU1-22P-201ENST00000363334 158 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNU6-743P-201ENST00000364151 106 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.280-201ENST00000364765 112 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNY4P18-201ENST00000391107 89 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNA5SP496-201ENST00000391240 109 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
EBF3Q9H4W6 AC010154.1-201ENST00000425857 269 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 AC009238.1-201ENST00000442165 424 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 AC009237.6-201ENST00000446969 424 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.712-201ENST00000517011 92 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 RNU2-60P-201ENST00000517290 128 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 MIR6129-201ENST00000616087 109 ntBASIC2.06□□□□□ -2.08
EBF3Q9H4W6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.06□□□□□ -2.08
EBF3Q9H4W6 U8.1-201ENST00000362843 134 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 SNORA25.7-201ENST00000364375 127 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 SNORA72-201ENST00000384339 132 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 SNORA40.5-201ENST00000391061 128 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.05□□□□□ -2.08
EBF3Q9H4W6 SNORD11-201ENST00000459124 84 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 RPS27P22-201ENST00000478056 241 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.05□□□□□ -2.08
EBF3Q9H4W6 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
EBF3Q9H4W6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
EBF3Q9H4W6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
EBF3Q9H4W6 RNU6-834P-201ENST00000362367 110 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 RNU6-1056P-201ENST00000383996 107 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.584-201ENST00000391090 114 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 AC097462.1-201ENST00000514125 324 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 SNORA4.4-201ENST00000515921 135 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 RNU6-856P-201ENST00000516959 98 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 RPL23AP91-201ENST00000569211 455 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
EBF3Q9H4W6 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
EBF3Q9H4W6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.04□□□□□ -2.08
EBF3Q9H4W6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
EBF3Q9H4W6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
EBF3Q9H4W6 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 RNU6-1064P-201ENST00000410626 104 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 EDDM3CP-201ENST00000415977 425 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 AC245047.4-201ENST00000433189 144 ntBASIC2.03□□□□□ -2.08
EBF3Q9H4W6 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms