Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-661P-201ENST00000362409 107 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNA5SP374-201ENST00000362939 125 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-832P-201ENST00000363319 107 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNU1-23P-201ENST00000363361 144 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 Y_RNA.360-201ENST00000365512 102 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-1328P-201ENST00000410938 106 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 AL161788.1-201ENST00000441805 169 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-1041P-201ENST00000516254 102 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 MIR4778-201ENST00000577635 80 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 MIR548Z-201ENST00000584743 97 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 MIR4762-201ENST00000585261 75 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NUCKS1Q9H1E3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-1125P-201ENST00000363601 107 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-279P-201ENST00000391297 101 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 RPL23AP83-201ENST00000434984 473 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 Z96811.1-201ENST00000445880 108 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 RNU1-142P-201ENST00000516682 145 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 MIR5004-201ENST00000579078 107 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 Y_RNA.773-201ENST00000607168 90 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 UCA1.1-201ENST00000620952 75 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 MIR8057-201ENST00000620957 69 ntBASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
NUCKS1Q9H1E3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-1084P-201ENST00000362498 107 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-363P-201ENST00000362895 105 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 SNORD115-19-201ENST00000363098 82 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 SNORD115-18-201ENST00000363293 82 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 U8.5-201ENST00000364528 136 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 SNORD115-17-201ENST00000364612 82 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 snoU2-30.1-201ENST00000365012 70 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 Y_RNA.454-201ENST00000384224 113 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 MIR218-1-201ENST00000384999 110 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 MIR1289-1-201ENST00000408836 144 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-733P-201ENST00000410759 104 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 BTF3P4-201ENST00000418852 495 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 MICF-203ENST00000432679 129 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 RPS23P4-201ENST00000487908 423 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 AC078899.2-201ENST00000595282 212 ntBASIC3.3□□□□□ -1.88
NUCKS1Q9H1E3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 SNORD56.5-201ENST00000364281 72 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-1296P-201ENST00000383879 107 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-979P-201ENST00000383896 107 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 RNU2-48P-201ENST00000410694 191 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 HMGN2P35-201ENST00000412164 270 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 UBBP3-201ENST00000445497 241 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 AC087499.4-201ENST00000448505 178 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 AL513534.2-201ENST00000603836 250 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 AC095038.3-201ENST00000634439 195 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 MIR203B-201ENST00000636080 86 ntBASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.29□□□□□ -1.88
NUCKS1Q9H1E3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 RNU4-67P-201ENST00000364569 141 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-409P-201ENST00000384114 104 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 MIR605-201ENST00000385078 83 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 RN7SKP200-201ENST00000410564 320 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 RNU6-402P-201ENST00000410678 103 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 RNA5SP144-201ENST00000410846 116 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 SNX2P2-201ENST00000424553 323 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 AL512326.2-201ENST00000426359 151 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 AC107083.1-201ENST00000439643 279 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 SNORA74D-201ENST00000516404 141 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 SNORD45.4-201ENST00000516629 73 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 SCARNA3-201ENST00000517097 143 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 MIR5588-201ENST00000581890 63 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 AL353149.1-201ENST00000610667 244 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 AC110079.1-202ENST00000635213 138 ntBASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.28□□□□□ -1.88
NUCKS1Q9H1E3 ICE2P2-201ENST00000483823 2787 ntBASIC3.28□□□□□ -1.89
NUCKS1Q9H1E3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MIR95-201ENST00000385072 81 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 RNA5SP323-201ENST00000391094 133 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AL627390.1-201ENST00000396055 340 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 FO393413.1-201ENST00000402892 195 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 MRPL35P3-201ENST00000421557 364 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AL353813.1-201ENST00000440700 253 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AL109933.2-201ENST00000452651 260 ntBASIC3.27□□□□□ -1.89
NUCKS1Q9H1E3 AP004217.1-201ENST00000480579 346 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms