Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 AL442128.1-201ENST00000615151 90 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.01□□□□□ -1.93
CNTNAP4Q9C0A0 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.486-201ENST00000384398 107 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-1152P-201ENST00000384576 107 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 SNORD12C-201ENST00000386307 89 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-440P-201ENST00000390882 105 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 RPS15AP28-201ENST00000435088 386 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 AC245517.4-201ENST00000448601 281 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-965P-201ENST00000516721 96 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 AC007012.1-201ENST00000567192 175 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 AC087685.1-201ENST00000587507 141 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 AL022345.2-201ENST00000606307 135 ntBASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.52-201ENST00000362760 96 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 MIR591-201ENST00000385290 95 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-412P-201ENST00000516434 106 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AC067747.1-201ENST00000608026 250 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AC015726.2-201ENST00000620112 122 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AL035470.1-201ENST00000622571 220 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 AC018630.2-201ENST00000534866 2403 ntBASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.66-201ENST00000362862 102 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 SNORD21-201ENST00000383953 95 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 MIR1263-201ENST00000408324 86 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RN7SKP123-201ENST00000410732 291 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU2-63P-201ENST00000410792 194 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 CALM2P4-201ENST00000430810 426 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RN7SL297P-201ENST00000483161 293 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 HMGN1P7-201ENST00000491722 313 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-109P-201ENST00000516364 107 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 SNORA40.13-201ENST00000516379 120 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-184P-201ENST00000516514 107 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-113P-201ENST00000516653 101 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 AC007229.1-201ENST00000590455 412 ntBASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
CNTNAP4Q9C0A0 RNA5SP125-201ENST00000364843 120 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.355-201ENST00000365462 98 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 SNORD24-201ENST00000383884 75 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 MIR218-1-201ENST00000384999 110 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 MIR561-201ENST00000385216 97 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 SNORD78.1-201ENST00000390866 65 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 AF228730.3-201ENST00000436691 102 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 MIR3199-1-201ENST00000582434 88 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 MIR6873-201ENST00000622788 63 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 AC002064.3-201ENST00000623448 346 ntBASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CNTNAP4Q9C0A0 RNU6-1014P-201ENST00000383940 103 ntBASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 Y_RNA.528-201ENST00000384575 108 ntBASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 EDDM3CP-201ENST00000415977 425 ntBASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 AL353689.1-201ENST00000438895 199 ntBASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CNTNAP4Q9C0A0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CNTNAP4Q9C0A0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.96□□□□□ -1.94
CNTNAP4Q9C0A0 SNORA19.1-201ENST00000410656 129 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RNA5SP225-201ENST00000410874 135 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 AL021397.1-201ENST00000451806 248 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RPL39P34-201ENST00000477141 156 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RNA5SP236-201ENST00000516169 116 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RNA5SP395-201ENST00000516567 118 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-341P-201ENST00000516973 96 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 RNU6-94P-201ENST00000607728 107 ntBASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.95□□□□□ -1.94
CNTNAP4Q9C0A0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 RNY1P10-201ENST00000363268 113 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 CD24P4-201ENST00000382840 243 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 MIR590-201ENST00000385008 97 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 RNU1-101P-201ENST00000391171 127 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 MIR1302-5-201ENST00000408164 150 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
CNTNAP4Q9C0A0 AC060773.1-201ENST00000421698 310 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms