Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SNORA22-201ENST00000383907 134 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 AL138827.1-201ENST00000402666 306 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 AL021397.1-201ENST00000451806 248 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 AL049830.1-201ENST00000468034 425 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 MIR4435-1-201ENST00000582552 80 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
FOXP3Q9BZS1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 SNORD116-21-201ENST00000384507 92 ntBASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 AL163195.1-201ENST00000496941 348 ntBASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 RNU6-693P-201ENST00000516134 107 ntBASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.7□□□□□ -1.98
FOXP3Q9BZS1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 MIR518F-201ENST00000384973 87 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 SNORD77.3-201ENST00000391113 65 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 IGKV1-22-201ENST00000524313 326 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 MIR4762-201ENST00000585261 75 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 AC025166.1-201ENST00000612411 163 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 AL121890.5-201ENST00000620848 304 ntBASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
FOXP3Q9BZS1 Y_RNA.35-201ENST00000362601 101 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 RNU6-859P-201ENST00000362728 107 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 RNU6-113P-201ENST00000516653 101 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 RNU6-1149P-201ENST00000516810 97 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 SCARNA15-202ENST00000516881 127 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 MIR3169-201ENST00000578032 83 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 MIR3613-201ENST00000579844 87 ntBASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
FOXP3Q9BZS1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 RNU6-862P-201ENST00000362804 105 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 RNA5SP493-201ENST00000364115 91 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 U8.5-201ENST00000364528 136 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 MIR3945-201ENST00000581853 98 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 MTND5P18-201ENST00000445624 1801 ntBASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
FOXP3Q9BZS1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 RNU6-880P-201ENST00000384526 107 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 AC099677.2-201ENST00000436385 175 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 TRBV12-1-201ENST00000479785 344 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 MIR5197-201ENST00000583721 112 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 AC022217.4-201ENST00000604389 163 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 AC006441.5-201ENST00000612680 209 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXP3Q9BZS1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
FOXP3Q9BZS1 RNU6-1298P-201ENST00000362456 101 ntBASIC2.65□□□□□ -1.99
FOXP3Q9BZS1 RNU6-147P-201ENST00000383983 107 ntBASIC2.65□□□□□ -1.99
FOXP3Q9BZS1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXP3Q9BZS1 MIR376A2-201ENST00000636782 80 ntBASIC2.65□□□□□ -1.99
FOXP3Q9BZS1 SNORD68-201ENST00000363214 84 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 RNU6-442P-201ENST00000383968 104 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 MIR802-201ENST00000390235 94 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 MIR548O-201ENST00000408583 114 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 SNRPGP14-201ENST00000435400 219 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 AC022513.1-201ENST00000624512 117 ntBASIC2.64□□□□□ -1.99
FOXP3Q9BZS1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 RNU6-23P-201ENST00000363283 107 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 SNORD14E-201ENST00000364009 85 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 Y_RNA.410-201ENST00000383992 113 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 MIR548A1-201ENST00000385041 97 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 AC008413.1-201ENST00000511864 177 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 AC134878.1-201ENST00000619901 243 ntBASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FOXP3Q9BZS1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 RNA5SP482-201ENST00000391269 118 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 MIR1263-201ENST00000408324 86 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 CALM2P4-201ENST00000430810 426 ntBASIC2.62□□□□□ -1.99
FOXP3Q9BZS1 AL606517.2-201ENST00000442855 241 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms