Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRTAP3-3Q9BYR6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 MIR133B-201ENST00000362210 119 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 Y_RNA.32-201ENST00000362589 110 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 U8.4-201ENST00000363626 134 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AL161935.2-201ENST00000414627 60 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AL445665.1-202ENST00000452436 324 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AC092349.1-201ENST00000504903 310 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AL360270.2-201ENST00000562952 5985 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 MIR4676-201ENST00000583078 72 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 Six3os1_2.1-201ENST00000616963 217 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AC090617.8-201ENST00000623339 167 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 AC027335.2-201ENST00000624030 375 ntBASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRTAP3-3Q9BYR6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 SNORD113.3-201ENST00000364630 78 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 RPS26P5-201ENST00000418544 335 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 RNU7-102P-201ENST00000458948 62 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 RN7SL20P-201ENST00000488827 297 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 AC107958.1-201ENST00000556576 290 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 MIR4472-2-201ENST00000582069 67 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 uc_338.16-201ENST00000621804 95 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 AL035425.3-201ENST00000564206 4996 ntBASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP3-3Q9BYR6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 SNORA60-201ENST00000362396 134 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 Y_RNA.109-201ENST00000363215 102 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 RNA5SP90-201ENST00000364801 99 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 RNU6-828P-201ENST00000364876 107 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 MIR579-201ENST00000385221 98 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 RNA5SP487-201ENST00000410186 122 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 RN7SL447P-201ENST00000494711 245 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 RN7SL435P-201ENST00000584418 282 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 AL359821.1-201ENST00000605519 182 ntBASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP3-3Q9BYR6 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
KRTAP3-3Q9BYR6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 RNU6-945P-201ENST00000383947 107 ntBASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 MIR1273E-201ENST00000581165 102 ntBASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 AL121839.2-201ENST00000565058 6943 ntBASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.52□□□□□ -2.01
KRTAP3-3Q9BYR6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KRTAP3-3Q9BYR6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms