Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
COL25A1Q9BXS0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
COL25A1Q9BXS0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 SNORD115-2-201ENST00000362842 82 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.171-201ENST00000363760 102 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 U8.5-201ENST00000364528 136 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 SNORD115-20-201ENST00000365099 82 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 AC079600.2-201ENST00000550076 130 ntBASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL25A1Q9BXS0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AC092881.1-201ENST00000638218 2733 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 SNORD68-201ENST00000363214 84 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.247-201ENST00000364500 92 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU6-1163P-201ENST00000364516 107 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 snoU2-30.1-201ENST00000365012 70 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 SNORA7.4-201ENST00000384249 137 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 SNORD77B-201ENST00000391112 67 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RN7SKP220-201ENST00000410611 288 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 Z98742.3-201ENST00000418637 326 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AL161932.1-201ENST00000437408 146 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RPS12P2-201ENST00000439728 269 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU7-113P-201ENST00000459273 62 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU6-998P-201ENST00000515894 101 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU6-539P-201ENST00000516665 103 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 RNU6-965P-201ENST00000516721 96 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 SCARNA3-201ENST00000517097 143 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AP002004.2-201ENST00000531656 154 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AC140658.3-201ENST00000567603 271 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 MIR5047-201ENST00000579212 100 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 U6.108-201ENST00000637764 58 ntBASIC3.32□□□□□ -1.88
COL25A1Q9BXS0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 RNU6-1084P-201ENST00000362498 107 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 RNU6-315P-201ENST00000362666 107 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 snoU2-30.2-201ENST00000362805 70 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.336-201ENST00000365307 109 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 SNORD6-201ENST00000365444 73 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 SNORA27-201ENST00000384323 126 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 RNA5SP467-201ENST00000391274 118 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 SNORD45.4-201ENST00000516629 73 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 MIR548AE2-201ENST00000583456 67 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COL25A1Q9BXS0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 MIR340-201ENST00000362125 95 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.140-201ENST00000363474 103 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 SNORA9.2-201ENST00000365361 133 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 MIR519C-201ENST00000385053 87 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 RNU7-96P-201ENST00000459535 64 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 RNU6-586P-201ENST00000517265 104 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
COL25A1Q9BXS0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.470-201ENST00000384307 117 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 RNU1-89P-201ENST00000384592 164 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 AC123900.1-201ENST00000420390 96 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 UBL5P1-201ENST00000507979 193 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 RNU6-579P-201ENST00000516879 102 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 MIR4765-201ENST00000585007 77 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
COL25A1Q9BXS0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 Y_RNA.332-201ENST00000365271 113 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 RN7SKP192-201ENST00000411291 327 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 SNORD109B-201ENST00000458961 67 ntBASIC3.28□□□□□ -1.88
COL25A1Q9BXS0 SNORD109A-201ENST00000459128 67 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms