Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 SNORA9.3-201ENST00000516383 129 ntBASIC2.35□□□□□ -2.03
NEIL1Q96FI4 RNU7-193P-201ENST00000516723 65 ntBASIC2.35□□□□□ -2.03
NEIL1Q96FI4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.35□□□□□ -2.03
NEIL1Q96FI4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NEIL1Q96FI4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NEIL1Q96FI4 SNORD68-201ENST00000363214 84 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 HMGN2P39-201ENST00000398005 273 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 MIR1263-201ENST00000408324 86 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 AC099677.2-201ENST00000436385 175 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.34□□□□□ -2.03
NEIL1Q96FI4 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.34□□□□□ -2.03
NEIL1Q96FI4 RN7SL297P-201ENST00000483161 293 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 GTF3AP2-201ENST00000557014 266 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 MIR3169-201ENST00000578032 83 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 MIR4762-201ENST00000585261 75 ntBASIC2.34□□□□□ -2.03
NEIL1Q96FI4 AC245060.5-201ENST00000610778 3293 ntBASIC2.34□□□□□ -2.04
NEIL1Q96FI4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NEIL1Q96FI4 MIR26A1-201ENST00000362205 77 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 RNU6-880P-201ENST00000384526 107 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 MIR548O-201ENST00000408583 114 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 MIR4679-2-201ENST00000578358 77 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 MIR4446-201ENST00000578505 67 ntBASIC2.33□□□□□ -2.04
NEIL1Q96FI4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
NEIL1Q96FI4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
NEIL1Q96FI4 U8.5-201ENST00000364528 136 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 MIR518A2-201ENST00000384966 87 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 MIR802-201ENST00000390235 94 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 CALM2P4-201ENST00000430810 426 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 AL606517.2-201ENST00000442855 241 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.32□□□□□ -2.04
NEIL1Q96FI4 RNU6-113P-201ENST00000516653 101 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 MIR3605-201ENST00000583214 100 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 MIR5197-201ENST00000583721 112 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 ZNF861P-201ENST00000588126 639 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 AL033523.1-201ENST00000605153 153 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 AC006441.5-201ENST00000612680 209 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
NEIL1Q96FI4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NEIL1Q96FI4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEIL1Q96FI4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 SNORD14E-201ENST00000364009 85 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RNU6-442P-201ENST00000383968 104 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 Y_RNA.528-201ENST00000384575 108 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RNA5SP465-201ENST00000391195 109 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 AL138827.1-201ENST00000402666 306 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.31□□□□□ -2.04
NEIL1Q96FI4 RNA5SP356-201ENST00000515972 94 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 SNORA31.25-201ENST00000517242 134 ntBASIC2.31□□□□□ -2.04
NEIL1Q96FI4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.31□□□□□ -2.04
NEIL1Q96FI4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NEIL1Q96FI4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NEIL1Q96FI4 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
NEIL1Q96FI4 RNU1-58P-201ENST00000362413 163 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 RNU6-268P-201ENST00000364174 107 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 RNA5SP21-201ENST00000410917 96 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.3□□□□□ -2.04
NEIL1Q96FI4 SNRPGP14-201ENST00000435400 219 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 RNU7-25P-201ENST00000516544 62 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 AC004486.1-201ENST00000546846 233 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 MIR3670-2-201ENST00000582974 65 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 MIR3670-1-201ENST00000584160 65 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 MIR3670-3-201ENST00000584855 65 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 MIR3670-4-201ENST00000612260 65 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 AC134878.1-201ENST00000619901 243 ntBASIC2.3□□□□□ -2.04
NEIL1Q96FI4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.3□□□□□ -2.04
NEIL1Q96FI4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NEIL1Q96FI4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEIL1Q96FI4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.29□□□□□ -2.04
NEIL1Q96FI4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 MIR9-1-201ENST00000385198 89 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NEIL1Q96FI4 RNA5SP184-201ENST00000411071 108 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 AC245047.3-201ENST00000429428 127 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 RNA5SP170-201ENST00000517150 101 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
NEIL1Q96FI4 AL137067.1-201ENST00000615933 120 ntBASIC2.29□□□□□ -2.04
NEIL1Q96FI4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NEIL1Q96FI4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNA5SP109-201ENST00000391010 116 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNU11-3P-201ENST00000391111 133 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNA5SP482-201ENST00000391269 118 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNA5SP89-201ENST00000410300 108 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNA5SP136-201ENST00000410906 107 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 AC003982.1-202ENST00000469928 248 ntBASIC2.28□□□□□ -2.04
NEIL1Q96FI4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.28□□□□□ -2.04
NEIL1Q96FI4 RNU6-168P-201ENST00000516189 101 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 878.4 ms