Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR1302-5-201ENST00000408164 150 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNU6-109P-201ENST00000516364 107 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNU6-184P-201ENST00000516514 107 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 AL442128.1-201ENST00000615151 90 ntBASIC2.5□□□□□ -2.01
CHFRQ96EP1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
CHFRQ96EP1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.5□□□□□ -2.01
CHFRQ96EP1 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 Y_RNA.203-201ENST00000364106 102 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 Y_RNA.323-201ENST00000365157 109 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 SNORA1-201ENST00000384107 130 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 MIR562-201ENST00000384894 95 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 MIR1283-1-201ENST00000408494 87 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.49□□□□□ -2.01
CHFRQ96EP1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
CHFRQ96EP1 RNU6-221P-201ENST00000459541 99 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 AC080013.2-201ENST00000460866 323 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 UBL5P3-201ENST00000475112 231 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 RPL39P34-201ENST00000477141 156 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 RNA5SP281-201ENST00000516504 135 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 RNU7-149P-201ENST00000516739 59 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 MIR4648-201ENST00000580107 72 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
CHFRQ96EP1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.49□□□□□ -2.01
CHFRQ96EP1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
CHFRQ96EP1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHFRQ96EP1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RNU6-1138P-201ENST00000365359 106 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 EDDM3CP-201ENST00000415977 425 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 MTATP6P21-201ENST00000440681 189 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 AC016717.1-201ENST00000448918 286 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 AC112771.1-201ENST00000463581 102 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RNU6-237P-201ENST00000515985 71 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RN7SKP12-201ENST00000516275 143 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 IGKV3-31-201ENST00000523109 329 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 RPL17P51-201ENST00000605218 238 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 Pinc.1-201ENST00000616452 154 ntBASIC2.48□□□□□ -2.01
CHFRQ96EP1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHFRQ96EP1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHFRQ96EP1 SNORA63.5-201ENST00000363548 123 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 Y_RNA.366-201ENST00000365540 102 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 MIR590-201ENST00000385008 97 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 MIR29B2-201ENST00000385055 81 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 MIR504-201ENST00000385065 83 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 SNORA19.1-201ENST00000410656 129 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 RNA5SP136-201ENST00000410906 107 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 RNA5SP270-201ENST00000411361 118 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 Z98742.2-201ENST00000431564 187 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 RPS4XP11-201ENST00000446897 772 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
CHFRQ96EP1 MIR449C-201ENST00000516047 92 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 MIR3129-201ENST00000581095 76 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.47□□□□□ -2.01
CHFRQ96EP1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.01
CHFRQ96EP1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHFRQ96EP1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHFRQ96EP1 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 RNU4-13P-201ENST00000364019 141 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 RNU6-975P-201ENST00000384296 105 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 MIR764-201ENST00000390811 85 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 RNU2-63P-201ENST00000410792 194 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 RNU6-57P-201ENST00000411348 103 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.46□□□□□ -2.02
CHFRQ96EP1 COX6CP6-201ENST00000490840 228 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 Y_RNA.685-201ENST00000516532 108 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
CHFRQ96EP1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHFRQ96EP1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHFRQ96EP1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHFRQ96EP1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CHFRQ96EP1 SNORA3A-201ENST00000364113 130 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 RNU6-1152P-201ENST00000384576 107 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 Y_RNA.544-201ENST00000384650 113 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 SNORA26-201ENST00000391286 122 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AC016909.1-201ENST00000415916 166 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AC003685.2-201ENST00000422795 395 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 RPL30P4-201ENST00000429309 333 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AL356320.1-201ENST00000429616 163 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 RNU7-14P-201ENST00000459331 62 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 OR9P1P-201ENST00000496431 281 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 RNU6-970P-201ENST00000516312 107 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AC079598.5-201ENST00000547460 117 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 MIR2681-201ENST00000581814 105 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 MIR4769-201ENST00000584126 77 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 AL137067.1-201ENST00000615933 120 ntBASIC2.45□□□□□ -2.02
CHFRQ96EP1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.45□□□□□ -2.02
CHFRQ96EP1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 254.9 ms