Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC008834.1-201ENST00000511612 175 ntBASIC2.68□□□□□ -1.98
ZNF428Q96B54 RNU6-1219P-201ENST00000516143 112 ntBASIC2.68□□□□□ -1.98
ZNF428Q96B54 AP002392.1-201ENST00000537692 208 ntBASIC2.68□□□□□ -1.98
ZNF428Q96B54 AL365265.1-201ENST00000621045 234 ntBASIC2.68□□□□□ -1.98
ZNF428Q96B54 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF428Q96B54 Y_RNA.262-201ENST00000364641 102 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 RNU6-818P-201ENST00000364837 108 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 AL603908.1-201ENST00000406098 201 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 AL161935.2-201ENST00000414627 60 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 CYCSP49-201ENST00000420810 319 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF428Q96B54 RNU6-182P-201ENST00000516970 105 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 MTND5P41-201ENST00000517498 206 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 AC021506.2-201ENST00000612354 169 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 AC021753.1-201ENST00000635724 168 ntBASIC2.67□□□□□ -1.98
ZNF428Q96B54 RNY3P5-201ENST00000384127 102 ntBASIC2.66□□□□□ -1.98
ZNF428Q96B54 MIR194-1-201ENST00000384892 85 ntBASIC2.66□□□□□ -1.98
ZNF428Q96B54 RNU5E-9P-201ENST00000411164 104 ntBASIC2.66□□□□□ -1.98
ZNF428Q96B54 AC003989.2-201ENST00000440224 169 ntBASIC2.66□□□□□ -1.98
ZNF428Q96B54 RNU7-120P-201ENST00000459334 63 ntBASIC2.66□□□□□ -1.98
ZNF428Q96B54 RNU6-833P-201ENST00000363486 107 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 Y_RNA.180-201ENST00000363867 113 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 SNORA4.2-201ENST00000365313 147 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 RNU6-424P-201ENST00000384367 105 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 MIR660-201ENST00000385235 97 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 RNU6-131P-201ENST00000391144 107 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 RNA5SP489-201ENST00000410986 109 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 RN7SKP101-201ENST00000411376 320 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 AC004965.1-201ENST00000413033 213 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 HMGN2P19-201ENST00000425149 265 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 AL445646.1-201ENST00000431784 216 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 snoU13.9-201ENST00000458927 103 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 AC079804.2-201ENST00000490376 200 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 RNU6-548P-201ENST00000517083 115 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.65□□□□□ -1.99
ZNF428Q96B54 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ZNF428Q96B54 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF428Q96B54 MIR126-201ENST00000362291 85 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 RNU4-41P-201ENST00000364426 143 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 Y_RNA.293-201ENST00000364908 93 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 Y_RNA.336-201ENST00000365307 109 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 RNU6-1080P-201ENST00000383982 107 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 MIR934-201ENST00000401241 83 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 SNRPGP10-201ENST00000432323 225 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 AC108210.2-201ENST00000503681 201 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF428Q96B54 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.64□□□□□ -1.99
ZNF428Q96B54 MIR4662B-201ENST00000579498 81 ntBASIC2.64□□□□□ -1.99
ZNF428Q96B54 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZNF428Q96B54 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF428Q96B54 snoU2_19.4-201ENST00000364329 80 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 Y_RNA.270-201ENST00000364693 104 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 RNU4-70P-201ENST00000384579 139 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 MIR522-201ENST00000385071 87 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZNF428Q96B54 RPL23AP42-201ENST00000471152 471 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 AC090255.1-201ENST00000495779 349 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.63□□□□□ -1.99
ZNF428Q96B54 RNU6-346P-201ENST00000516288 111 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 AC104465.1-201ENST00000611365 139 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 AL591926.4-201ENST00000616895 298 ntBASIC2.63□□□□□ -1.99
ZNF428Q96B54 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
ZNF428Q96B54 snoU2-30.1-201ENST00000365012 70 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 RNU6-804P-201ENST00000384286 107 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 MIR626-201ENST00000385032 94 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 AL021397.1-201ENST00000451806 248 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 AL138752.1-201ENST00000452964 351 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 AC100767.1-201ENST00000528178 123 ntBASIC2.62□□□□□ -1.99
ZNF428Q96B54 RNU6-1020P-201ENST00000363684 107 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 RNU6-482P-201ENST00000391068 107 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 SNORA40.18-201ENST00000391200 128 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 RNU2-55P-201ENST00000411146 174 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 AL603825.1-201ENST00000438481 80 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 HMGN2P23-201ENST00000456759 269 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 snoU13.23-201ENST00000458863 104 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 SCARNA8-201ENST00000515924 131 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 Y_RNA.700-201ENST00000516806 100 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 RNU6-453P-201ENST00000516819 85 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 MIR3133-201ENST00000583157 78 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 AC120024.3-201ENST00000603167 156 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 AL391903.3-201ENST00000612158 163 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
ZNF428Q96B54 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ZNF428Q96B54 RNU6-103P-201ENST00000363686 107 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 Y_RNA.170-201ENST00000363746 110 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 Y_RNA.796-201ENST00000364268 102 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 Y_RNA.233-201ENST00000364407 101 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 Y_RNA.799-201ENST00000364992 102 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 RNU6-125P-201ENST00000384505 107 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 MIR15B-201ENST00000385045 98 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
ZNF428Q96B54 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 MIR891A-201ENST00000401237 79 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 RN7SKP164-201ENST00000516138 266 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 RNU1-40P-201ENST00000516816 164 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 RNU1-97P-201ENST00000516872 164 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 DEFB122-202ENST00000569013 197 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 SNORA77B-201ENST00000578179 125 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms