Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 Y_RNA.424-201ENST00000384063 103 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.509-201ENST00000384506 99 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-308P-201ENST00000390957 107 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 POLR2J4-204ENST00000418424 324 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 POLR2KP2-201ENST00000438155 177 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORD123-201ENST00000459473 70 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 AC108729.3-201ENST00000513484 108 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 C8orf59P2-201ENST00000603441 271 ntBASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRAF3IP1Q8TDR0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-1209P-201ENST00000363655 107 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 RNA5SP48-201ENST00000363969 126 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.286-201ENST00000364813 102 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-392P-201ENST00000364926 101 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORA72.4-201ENST00000384174 132 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU7-41P-201ENST00000515917 61 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-830P-201ENST00000516353 107 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORA18.7-201ENST00000516910 131 ntBASIC0.95□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.136-201ENST00000363444 102 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.183-201ENST00000363882 113 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-801P-201ENST00000364087 105 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.445-201ENST00000384168 102 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 SNRPGP14-201ENST00000435400 219 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU7-141P-201ENST00000459304 62 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-437P-201ENST00000459408 95 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 NDUFA4P2-201ENST00000489989 244 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR4498-201ENST00000577599 66 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR4300-201ENST00000581016 96 ntBASIC0.94□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU4-80P-201ENST00000363200 141 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-442P-201ENST00000383968 104 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORD38C-201ENST00000384381 69 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORA36B-201ENST00000410438 131 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 PMCHL1-202ENST00000423102 261 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 AL603825.1-201ENST00000438481 80 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU11-2P-201ENST00000516898 142 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 SEPT14P17-201ENST00000617978 177 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 AC090574.1-201ENST00000623186 233 ntBASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR103A2-201ENST00000362154 78 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.242-201ENST00000364473 110 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-474P-201ENST00000384243 107 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORD115-46-201ENST00000390982 71 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.645-201ENST00000391229 102 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 TRMT112P2-201ENST00000512910 132 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-191P-201ENST00000516295 94 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-1046P-201ENST00000516538 107 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU6-1007P-201ENST00000516586 107 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 AC008507.4-201ENST00000585464 127 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 AC124312.5-201ENST00000604451 268 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 AL160413.1-201ENST00000622780 310 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 MTND4P29-201ENST00000503122 1372 ntBASIC0.92□□□□□ -2.26
TRAF3IP1Q8TDR0 SNORD113-8-201ENST00000363497 74 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 RNU2-14P-201ENST00000411053 191 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 AC005840.1-201ENST00000498412 377 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.715-201ENST00000517082 110 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.721-201ENST00000517207 102 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 AC104695.3-201ENST00000604052 296 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 MIR376A1-201ENST00000616574 68 ntBASIC0.91□□□□□ -2.26
TRAF3IP1Q8TDR0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.9□□□□□ -2.26
TRAF3IP1Q8TDR0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.61-201ENST00000362835 102 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-450P-201ENST00000364654 107 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.394-201ENST00000383942 103 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.418-201ENST00000384029 102 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.460-201ENST00000384255 102 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-823P-201ENST00000391042 103 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 MIR1252-201ENST00000408861 65 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 FABP5P4-201ENST00000437203 171 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 HSPE1P25-201ENST00000455484 251 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-496P-201ENST00000516145 99 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-397P-201ENST00000516226 104 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 AC005357.1-201ENST00000588399 301 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Pinc.1-201ENST00000616452 154 ntBASIC0.9□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-899P-201ENST00000363947 107 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-1048P-201ENST00000364054 107 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-268P-201ENST00000364174 107 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.338-201ENST00000365320 114 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.389-201ENST00000383924 113 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 SNORA26.5-201ENST00000391215 123 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 Y_RNA.631-201ENST00000459607 101 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
TRAF3IP1Q8TDR0 RNU6-897P-201ENST00000517135 105 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms