Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 RNU7-193P-201ENST00000516723 65 ntBASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.23□□□□□ -2.05
PIK3C3Q8NEB9 AC016717.2-201ENST00000609089 5141 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 RN7SKP200-201ENST00000410564 320 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 MTND4LP9-201ENST00000427694 174 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 RNA5SP272-201ENST00000516095 111 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 AL365205.2-201ENST00000594586 68 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 U1.36-201ENST00000620684 176 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 AP001340.1-201ENST00000624405 217 ntBASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.22□□□□□ -2.05
PIK3C3Q8NEB9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 SNORD14E-201ENST00000364009 85 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 MIR539-201ENST00000365690 78 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-442P-201ENST00000383968 104 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 SUB1P4-201ENST00000566062 339 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 MIR6817-201ENST00000615588 66 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 TUG1_4.1-201ENST00000619464 181 ntBASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.21□□□□□ -2.06
PIK3C3Q8NEB9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-888P-201ENST00000363010 101 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP68-201ENST00000363885 119 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 Y_RNA.336-201ENST00000365307 109 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-1081P-201ENST00000384537 107 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 MIR634-201ENST00000385208 97 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 MIR23A-201ENST00000385245 73 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP501-201ENST00000410990 112 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 STAG3L5P-204ENST00000443759 179 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 HMGN2P32-201ENST00000444648 269 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 AC108938.1-201ENST00000451204 136 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 SNORA31.25-201ENST00000517242 134 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.2□□□□□ -2.06
PIK3C3Q8NEB9 SNORD50B-201ENST00000364995 70 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 SNORA20-201ENST00000384662 132 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 MIR624-201ENST00000385217 97 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-460P-201ENST00000391158 108 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AL034345.1-201ENST00000407768 123 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP127-201ENST00000411051 133 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-62P-201ENST00000516526 102 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AP001328.1-201ENST00000528550 176 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AC007751.1-201ENST00000529260 376 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 MIR548AI-201ENST00000579940 88 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 MIR3162-201ENST00000581818 82 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AC131055.1-201ENST00000584626 316 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 AC006441.5-201ENST00000612680 209 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PIK3C3Q8NEB9 RNU2-7P-201ENST00000410794 178 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 AC090255.1-201ENST00000495779 349 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 CYCTP-201ENST00000504253 315 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 SNORA18.4-201ENST00000516440 124 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 SNORA31.10-201ENST00000516482 106 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP148-201ENST00000516527 94 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 SNORD45.4-201ENST00000516629 73 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 U7.2-201ENST00000607576 63 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PIK3C3Q8NEB9 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 Y_RNA.291-201ENST00000364886 113 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-915P-201ENST00000364943 103 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 SNORD61-201ENST00000384252 73 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNA5SP450-201ENST00000411206 102 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.17□□□□□ -2.06
PIK3C3Q8NEB9 RNU6-479P-201ENST00000516348 105 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms